Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2571 ATGGCTCATCCTTCCCTTCTTCCGTCCTCAACGTCGTCGTTTCTGGGTCACTTTCAACTCTTTCCGGCTCCACTGTCCTCCGGACTTCTCTACAGAAATGGGAACGGAGGCGCGGTGGCGCCGGTGAAGGCCACTGCGGCTGGGTCCGGGGTTGTATTGGTGGAGAAGTCTGAGGCAGAGAGGCCCCACCGGCTTAAAATAACTTACAATGAGAAAATCATTCCCTTGCTTATGGAAGAATTCAAGTACACCAATATACACGAGGTCCCTAAAATTGAGAAGGTCGTGGTTAATTGCGGTATCGGAGATGCTGCACAAAATGCAAAGGGTTTGGAGGCGGCAATGAATGACCTAGCACTCATCACAGGGCAGCGGCCTGTCAAGACCAGAGCCAGGGCTTCAGTTGCCACCTTCAAGATCAGGGAAGGCCAACCCCTTGGGATTGCTGTCACACTCAGAGGAAAATTGATGCACTCTTTCCTAGACCGACTTATCAACTTGGGGCTTCCCAGGACAAGGGATTTCCAAGGTGTTAACGCCAACAGTTTCGATGGACACGGAAATTACAGCATCGGCATCAAGGACCAGAGCGTGTTCCCGGAAATCAGGTCTGACATCGTCAGCAAGCCTAGAGGAATGGACGTGTGTATAACAACAACGGCTAAAACTGATCAAGAAGCAAGCAGATTACTGGCTCTCATGGGCATGCCCTTCAGAGAGGGAGGTGGCCCCGCTACAGCAATTCGCAAAAAGAAGCTCAAGTCTCATCATTTTGACTCAAAATCAAAGAGCAGAGCAAGGAGGTGA 807 0.5081 MAHPSLLPSSTSSFLGHFQLFPAPLSSGLLYRNGNGGAVAPVKATAAGSGVVLVEKSEAERPHRLKITYNEKIIPLLMEEFKYTNIHEVPKIEKVVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKLMHSFLDRLINLGLPRTRDFQGVNANSFDGHGNYSIGIKDQSVFPEIRSDIVSKPRGMDVCITTTAKTDQEASRLLALMGMPFREGGGPATAIRKKKLKSHHFDSKSKSRARR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2571 268 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Prci12g2571 268 Gene3D - 56 240 IPR022803 -
Prci12g2571 268 SUPERFAMILY RL5-like 64 239 IPR022803 -
Prci12g2571 268 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Prci12g2571 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 67 242 IPR002132 GO:0003735|GO:0005840|GO:0006412
Prci12g2571 268 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Prci12g2571 268 FunFam 50S ribosomal protein L5 60 240 - -
Prci12g2571 268 Pfam Ribosomal protein L5 85 141 IPR031310 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2571 77 218 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 26.761 1.64e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2571 K02931 - zju:107432948 402.519