Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2556 ATGGGAAACAGTGAAGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCATGCTAATCAAGGCAGCCAGACTAACATTCATGTCTATCCTGATTGGGCGGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATACCACCATACTATAACCCAGCTGTGAGTTCTGGTCACCCTCACCCATACATGTGGCCGCCACAGCCCATGATGCCACCACCATATGGGACTCCTTACGCAGCAATTTATTCACATGGAGGTGTTTATCCTCATCCTGCAATTCCAATAGGGCCACAGTCACATGGTCAAGGAGTTCCAACCTCACCTGCAGCTGGAACTCTTTTGAACATAGAGACACCAACAAAATCTTATGGAATCACTGATCAGGGTTTAATGAAGAAATTGAAGGGGTTTGATGGACTTGCAATGTCTATCGGAAATGGCAATGCCGAAAGTACTGACCGTGGAGCAGAAAACAGGCTCTCGCAGAGTCTGGATAGTGAGAGTTTCAGTGATGGAAGTGACACCAACACTGCAGGGGCTAATCAAGCAAAAAAGAAAAGAAGCCGTGAGGGAACACCAGCTACTGATGGAGATGGCAAGACAGGGAGACAAGCAAATCCAGTTTCCAAAGCAGGTGGAGCTTCTAATAAGATGACATCAATTACCCCAGCCACTGTTGTTGGAACAGTAGTTTCTTCTGGTATGACAACAGCGTTGGAGCTAAGGAACCCATCTGTTCTTTCAACACATTCCCCGAGTAATCCAAAGCCTTGCGCAGTAGTGCCTCCTGAAGCTTGGATACAGAATGAGCGTGATCAGAAACGGGAGAGGAGAAAGCAATCAAATCGGGAATCTGCAAGACGGTCCCGCTTAAGAAAGCAGGCCGAGACTGAAGAACTTGCACGAAAAGTTGAATCCTTGACATCTGAGAATATTACATTGAAATCAGAAATAAATCGATTGACCGAAAGTTCGGGGAAACTTAAGATGGAAAATGAGACATTGATGGAGAAACTGAAAAATGCTCGAGGACAGAAGGATGGAATCATTTTGACACCTAGTACAGAAAATTTGCTATCCAGGGTTAACAATTCTAGTTCTTGTGATAATAATAGAACTAAGGAGGGTGAGAACGCTTTGTGTGAGAAGAAGCCGAACTCAGGAGCAAAGTTGCATCAACTATTGGACACGAATCCTAGAACTGATGCCGTGGCAGCTGGCTGA 1239 0.4528 MGNSEEGKSTKTEKPSSPVAVDHANQGSQTNIHVYPDWAAMQAYYGPRVSIPPYYNPAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPAIPIGPQSHGQGVPTSPAAGTLLNIETPTKSYGITDQGLMKKLKGFDGLAMSIGNGNAESTDRGAENRLSQSLDSESFSDGSDTNTAGANQAKKKRSREGTPATDGDGKTGRQANPVSKAGGASNKMTSITPATVVGTVVSSGMTTALELRNPSVLSTHSPSNPKPCAVVPPEAWIQNERDQKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKLKMENETLMEKLKNARGQKDGIILTPSTENLLSRVNNSSSCDNNRTKEGENALCEKKPNSGAKLHQLLDTNPRTDAVAAG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2556 412 MobiDBLite consensus disorder prediction 153 223 - -
Prci12g2556 412 Pfam bZIP transcription factor 275 338 IPR004827 GO:0003700|GO:0006355
Prci12g2556 412 Coils Coil 295 350 - -
Prci12g2556 412 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Prci12g2556 412 Gene3D - 277 332 - -
Prci12g2556 412 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 282 297 IPR004827 GO:0003700|GO:0006355
Prci12g2556 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 277 340 IPR004827 GO:0003700|GO:0006355
Prci12g2556 412 SUPERFAMILY Leucine zipper domain 279 334 IPR046347 GO:0003700|GO:0006355
Prci12g2556 412 MobiDBLite consensus disorder prediction 273 302 - -
Prci12g2556 412 CDD bZIP_plant_GBF1 280 328 IPR045314 GO:0003700|GO:0006355
Prci12g2556 412 FunFam G-box binding factor 3 278 333 - -
Prci12g2556 412 SMART brlzneu 275 339 IPR004827 GO:0003700|GO:0006355
Prci12g2556 412 Pfam Disordered region downstream of MFMR 132 251 - -
Prci12g2556 412 MobiDBLite consensus disorder prediction 153 187 - -
Prci12g2556 412 MobiDBLite consensus disorder prediction 366 390 - -
Prci12g2556 412 MobiDBLite consensus disorder prediction 250 302 - -
Prci12g2556 412 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 381 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci12g2556 412 MobiDBLite consensus disorder prediction 13 28 - -
Prci12g2556 412 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2556 Prci-Chr12 43024936 43030732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2556 1 412 bZIP Transcription Factor Family AT2G46270 52.506 9.06e-116 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci12g2556 MFMR_assoc 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2556 K09060 - gmx:778133 569.696