Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2555 ATGGGAAACAGTGAAGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCATGCTAATCAAGGCAGCCAGACTAACATTCATGTCTATCCTGATTGGGCGGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATACCACCATACTATAACCCAGCTGTGAGTTCTGGTCACCCTCACCCATACATGTGGCCGCCACAGCCCATGATGCCACCACCATATGGGACTCCTTACGCAGCAATTTATTCACATGGAGGTGTTTATCCTCATCCTGCAATTCCAATAGGGCCACAGTCACATGGTCAAGGAGTTCCAACCTCACCTGCAGCTGGAACTCTTTTGAACATAGAGACACCAACAAAATCTTATGGAATCACTGATCAGGGTTTAATGAAGAAATTGAAGGGGTTTGATGGACTTGCAATGTCTATCGGAAATGGCAATGCCGAAAGTACTGACCGTGGAGCAGAAAACAGGCTCTCGCAGAGTCTGGATAGTGAGAGTTTCAGTGATGGAAGTGACACCAACACTGCAGGGGCTAATCAAGCAAAAAAGAAAAGAAGCCGTGAGGGAACACCAGCTACTGCAGATGGAGATGGCAAGACAGGGAGACAAGCAAATCCAGTTTCCAAAGCAGGTGGAGCTTCTAATAAGATGACATCAATTACCCCAGCCACTGTTGTTGGAACAGTAGTTTCTTCTGGTATGACAACAGCGTTGGAGCTAAGGAACCCATCTGTTCTTTCAACACATTCCCCGAGTAATCCAAAGCCTTGCGCAGTAGTGCCTCCTGAAGCTTGGATACAGAATGAGCGTGATCAGAAACGGGAGAGGAGAAAGCAATCAAATCGGGAATCTGCAAGACGGTCCCGCTTAAGAAAGCAGGCCGAGACTGAAGAACTTGCACGAAAAGTTGAATCCTTGACATCTGAGAATATTACATTGAAATCAGAAATAAATCGATTGACCGAAAGTTCGGGGAAACTTAAGATGGAAAATGAGACATTGATGGAGAAACTGAAAAATGCTCGAGGACAGAAGGATGGAATCATTTTGACACCTAGTACAGAAAATTTGCTATCCAGGGTTAACAATTCTAGTTCTTGTGATAATAATAGAACTAAGGAGGGTGAGAACGCTTTGTGTGAGAAGAAGCCGAACTCAGGAGCAAAGTTGCATCAACTATTGGACACGAATCCTAGAACTGATGCCGTGGCAGCTGGCTGA 1242 0.4533 MGNSEEGKSTKTEKPSSPVAVDHANQGSQTNIHVYPDWAAMQAYYGPRVSIPPYYNPAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPAIPIGPQSHGQGVPTSPAAGTLLNIETPTKSYGITDQGLMKKLKGFDGLAMSIGNGNAESTDRGAENRLSQSLDSESFSDGSDTNTAGANQAKKKRSREGTPATADGDGKTGRQANPVSKAGGASNKMTSITPATVVGTVVSSGMTTALELRNPSVLSTHSPSNPKPCAVVPPEAWIQNERDQKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKLKMENETLMEKLKNARGQKDGIILTPSTENLLSRVNNSSSCDNNRTKEGENALCEKKPNSGAKLHQLLDTNPRTDAVAAG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2555 413 MobiDBLite consensus disorder prediction 367 413 - -
Prci12g2555 413 MobiDBLite consensus disorder prediction 274 305 - -
Prci12g2555 413 MobiDBLite consensus disorder prediction 251 305 - -
Prci12g2555 413 FunFam G-box binding factor 3 279 334 - -
Prci12g2555 413 CDD bZIP_plant_GBF1 281 329 IPR045314 GO:0003700|GO:0006355
Prci12g2555 413 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 283 298 IPR004827 GO:0003700|GO:0006355
Prci12g2555 413 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 278 341 IPR004827 GO:0003700|GO:0006355
Prci12g2555 413 Coils Coil 296 351 - -
Prci12g2555 413 Pfam bZIP transcription factor 276 339 IPR004827 GO:0003700|GO:0006355
Prci12g2555 413 SUPERFAMILY Leucine zipper domain 280 335 IPR046347 GO:0003700|GO:0006355
Prci12g2555 413 Gene3D - 278 333 - -
Prci12g2555 413 SMART brlzneu 276 340 IPR004827 GO:0003700|GO:0006355
Prci12g2555 413 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Prci12g2555 413 MobiDBLite consensus disorder prediction 153 187 - -
Prci12g2555 413 MobiDBLite consensus disorder prediction 153 224 - -
Prci12g2555 413 Pfam Disordered region downstream of MFMR 132 252 - -
Prci12g2555 413 MobiDBLite consensus disorder prediction 13 28 - -
Prci12g2555 413 MobiDBLite consensus disorder prediction 1 28 - -
Prci12g2555 413 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 382 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2555 Prci-Chr12 43024936 43030736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2555 1 413 bZIP Transcription Factor Family AT2G46270 52.381 1.07e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci12g2555 MFMR_assoc 3.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2555 K09060 - gmx:778133 565.074