Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2553 ATGGGAAACAGTGAAGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCATGCTAATCAAGGCAGCCAGACTAACATTCATGTCTATCCTGATTGGGCGGCCATGCAGGCATATTATGGGCCAAGAGTCTCCATACCACCATACTATAACCCAGCTGTGAGTTCTGGTCACCCTCACCCATACATGTGGCCGCCACAGCCCATGATGCCACCACCATATGGGACTCCTTACGCAGCAATTTATTCACATGGAGGTGTTTATCCTCATCCTGCAATTCCAATAGGGCCACAGTCACATGGTCAAGGAGTTCCAACCTCACCTGCAGGTTTAATGAAGAAATTGAAGGGGTTTGATGGACTTGCAATGTCTATCGGAAATGGCAATGCCGAAAGTACTGACCGTGGAGCAGAAAACAGGCTCTCGCAGAGTCTGGATAGTGAGAGTTTCAGTGATGGAAGTGACACCAACACTGCAGGGGCTAATCAAGCAAAAAAGAAAAGAAGCCGTGAGGGAACACCAGCTACTGCAGATGGAGATGGCAAGACAGGGAGACAAGCAAATCCAGTTTCCAAAGCAGGTGGAGCTTCTAATAAGATGACATCAATTACCCCAGCCACTGTTGTTGGAACAGTAGTTTCTTCTGGTATGACAACAGCGTTGGAGCTAAGGAACCCATCTGTTCTTTCAACACATTCCCCGAGTAATCCAAAGCCTTGCGCAGTAGTGCCTCCTGAAGCTTGGATACAGAATGAGCGTGATCAGAAACGGGAGAGGAGAAAGCAATCAAATCGGGAATCTGCAAGACGGTCCCGCTTAAGAAAGCAGGCCGAGACTGAAGAACTTGCACGAAAAGTTGAATCCTTGACATCTGAGAATATTACATTGAAATCAGAAATAAATCGATTGACCGAAAGTTCGGGGAAACTTAAGATGGAAAATGAGACATTGATGGAGAAACTGAAAAATGCTCGAGGACAGAAGGATGGAATCATTTTGACACCTAGTACAGAAAATTTGCTATCCAGGGTTAACAATTCTAGTTCTTGTGATAATAATAGAACTAAGGAGGGTGAGAACGCTTTGTGTGAGAAGAAGCCGAACTCAGGAGCAAAGTTGCATCAACTATTGGACACGAATCCTAGAACTGATGCCGTGGCAGCTGGCTGA 1185 0.4565 MGNSEEGKSTKTEKPSSPVAVDHANQGSQTNIHVYPDWAAMQAYYGPRVSIPPYYNPAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPAIPIGPQSHGQGVPTSPAGLMKKLKGFDGLAMSIGNGNAESTDRGAENRLSQSLDSESFSDGSDTNTAGANQAKKKRSREGTPATADGDGKTGRQANPVSKAGGASNKMTSITPATVVGTVVSSGMTTALELRNPSVLSTHSPSNPKPCAVVPPEAWIQNERDQKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKLKMENETLMEKLKNARGQKDGIILTPSTENLLSRVNNSSSCDNNRTKEGENALCEKKPNSGAKLHQLLDTNPRTDAVAAG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2553 394 CDD bZIP_plant_GBF1 262 310 IPR045314 GO:0003700|GO:0006355
Prci12g2553 394 SMART brlzneu 257 321 IPR004827 GO:0003700|GO:0006355
Prci12g2553 394 Pfam bZIP transcription factor 257 320 IPR004827 GO:0003700|GO:0006355
Prci12g2553 394 MobiDBLite consensus disorder prediction 347 361 - -
Prci12g2553 394 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 363 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci12g2553 394 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 264 279 IPR004827 GO:0003700|GO:0006355
Prci12g2553 394 SUPERFAMILY Leucine zipper domain 261 316 IPR046347 GO:0003700|GO:0006355
Prci12g2553 394 MobiDBLite consensus disorder prediction 131 205 - -
Prci12g2553 394 FunFam G-box binding factor 3 260 315 - -
Prci12g2553 394 MobiDBLite consensus disorder prediction 131 168 - -
Prci12g2553 394 Gene3D - 259 314 - -
Prci12g2553 394 Coils Coil 277 332 - -
Prci12g2553 394 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Prci12g2553 394 Pfam Disordered region downstream of MFMR 115 233 - -
Prci12g2553 394 MobiDBLite consensus disorder prediction 347 394 - -
Prci12g2553 394 MobiDBLite consensus disorder prediction 13 28 - -
Prci12g2553 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 259 322 IPR004827 GO:0003700|GO:0006355
Prci12g2553 394 MobiDBLite consensus disorder prediction 255 286 - -
Prci12g2553 394 MobiDBLite consensus disorder prediction 1 28 - -
Prci12g2553 394 MobiDBLite consensus disorder prediction 232 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2553 Prci-Chr12 43024936 43030738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2553 1 394 bZIP Transcription Factor Family AT2G46270 49.762 1.89e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci12g2553 MFMR_assoc 1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2553 K09060 - gmx:778133 529.25