Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2517 ATGTCCCAACAAAAGCAAACTTCAACACTAATCTCTCCCCCGTCTCATCAACCTTGCTTTTTCCCTTTTGAGGTGAGTAGCATTGAATGGGAGTTCATTAACATGTCAGATCAAGAAGAAGATCTAATTCACAGAATGCACCGACTTGTTGGAGACAGGTGGGGCCTGATAGCTGGGAGGATTCCAGGACGAAAAGCTGAGGAGATTGAAAGGTTTTGGATGATGACATATGGAGAAGTGTTTGCCAGCAAACGAGAACAACTCAACAGACGAAGCTCTTCATGTTAA 288 0.4375 MSQQKQTSTLISPPSHQPCFFPFEVSSIEWEFINMSDQEEDLIHRMHRLVGDRWGLIAGRIPGRKAEEIERFWMMTYGEVFASKREQLNRRSSSC 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2517 95 Gene3D - 36 77 - -
Prci12g2517 95 CDD SANT 34 75 IPR001005 -
Prci12g2517 95 FunFam MYB-like transcription factor 34 76 - -
Prci12g2517 95 Pfam Myb-like DNA-binding domain 36 74 IPR001005 -
Prci12g2517 95 SUPERFAMILY Homeodomain-like 36 76 IPR009057 -
Prci12g2517 95 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 34 79 - -
Prci12g2517 95 SMART sant 31 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2517 Prci-Chr12 42772604 42774278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2517 35 87 MYB Transcription Factor Family AT5G52600 49.057 3.81e-13 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci12g2517 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2517 K09422 - egr:104443376 120.938