Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2516 ATGAAGTGGGAACAACTCAGCCTGATCAGTGAGCTAATCCAAGGGAAGGAGTTTGCAGAGCAGCTCTGTGCGCATCTTTCTTCCTCCTCGTCTCTTCGAGAGAAGGAGCTCTTAGTAGAGAAAATTCTATCTTCCTACGAGAAAGCACTGTCCATGCTGAATTGGGGAGCTGATGTGGCAGACACTGACATCGTCGATGGCAGGATGATGATGGATTCTCTCTGTTCCTTCATTGGTGGGAGCCCCAGGAGTAAGGTGTTGGACCAAGATTCTAACCACAAGGATTCCTTCAAGAAAGGAAAGACCATGCCCAGATGGACAAAGAAAGTGAAGGCTTGCCCAGGAACAGGGCTTGAAGGGCCTCTCGGCGATGATTATAGCTGGAGAAAATATGGACAGAAGGATATTCTAGGATCCAAGTTTCCGAGAGGATATTACAGATGTACCCACCGAAATGTACAAGGTTGTCTGGCCACAAAGCAAGTTCAAAGGTCAGATGAAGACCCGACAATTCTTGAGATAACCTACAGAGGAAGACACACGTGCACTCAGGAGTCTCATGTGAAGAAGACATTACCATTAAAAAGAAAGATGGGTTTGGTTGAAAATCCAATGCAGAAGCACCAAGATGATGAACCACATGAACAAAAACCACTGGAACTAAACCCAGAAGCGTTTTTAAATCTTGGAGCGGAGCTTGAAGTTAAAACAGAGGATTTGGACGCGAAGGAGGACATTTTCCAACCCTTTTGCTTCCCTTCTGCGTCAATAGGATCAGAGAATGAGGGCAGCCTTTTATTCTCCGAGACAAACCACTTCCTGGAAATCCTCTCTTCTCCTAAGTTCATCTCCCCAGCAACCTCGGAATCCAACATTTTCTGTCTGAATGTGCAGACTTCAGAATCTGATGTCACTGATATAGTTTCAGCTCCAACTTCGGTCACCAATTCCCCAATAGCTGATTTGGATCTCTTCGATTTTGAATCCAATTTCCCTTTCAACATTCCAGAACCATTCTCTTCATAG 1026 0.4513 MKWEQLSLISELIQGKEFAEQLCAHLSSSSSLREKELLVEKILSSYEKALSMLNWGADVADTDIVDGRMMMDSLCSFIGGSPRSKVLDQDSNHKDSFKKGKTMPRWTKKVKACPGTGLEGPLGDDYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTILEITYRGRHTCTQESHVKKTLPLKRKMGLVENPMQKHQDDEPHEQKPLELNPEAFLNLGAELEVKTEDLDAKEDIFQPFCFPSASIGSENEGSLLFSETNHFLEILSSPKFISPATSESNIFCLNVQTSESDVTDIVSAPTSVTNSPIADLDLFDFESNFPFNIPEPFSS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2516 341 FunFam WRKY transcription factor 53 108 185 - -
Prci12g2516 341 Pfam WRKY DNA -binding domain 124 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g2516 341 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g2516 341 Gene3D WRKY domain 104 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g2516 341 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g2516 341 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 269 IPR044810 GO:0003700
Prci12g2516 341 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2516 Prci-Chr12 42735800 42738198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2516 2 208 WRKY Transcription Factor Family AT5G24110 45.933 3.04e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci12g2516 WRKY 2.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2516 - - gmx:100790050 388.652