Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2504 ATGGGATTCGAAATTCAATCATCAGCATACTCGAACCTCCAGTCAATCTTGGTATCTGAGTTGCAAGAGAACAAAGAAGCAATTTTATGTTCCTACGCTTCATGGCTTGAAAAGCATCCCTCTGCACTGGACAAGTTTGAGGAAATGATGAGCATCGCCAAAGACAAAGAGATTGTTGTGTTTCTGGACTATGATGGAACTCTATCTCCCATTGTTGATGACCCTGATCGTGCTAATATGACTGATGCTATGCGCACAGCAGTAAATGAAGTTGCTTGTTGCTTTCCTACTGCAATTGTCAGTGGAAGGAGTCGGAAAAAGGTACGTGAATTTGTGAGGTTAAGAAATATCTACTATGCTGGAAGTCATGGGATGGATATATCAACTCCAAAAGGCTCCTCAAAAGCTGAAGACCAGAAACATCAGACTAGGGCTGTTGATGAAAAGGGTAATCAAGTAGTTCACTTTCATCCTGCAGGAGAATTCCTGCCAACCATCAAGGAGATAATTCAGGTTCTGAAAGAAAATGTTCTAACGGTAAATGGGTCCAAGATAGAAGATAATATGTTCTGCATCACCGTACACTACAGGCTTGTGAAAAATGAAAAGGAAATTGAAATTCTCAGAAAGATGGTGGAATCTATCATGGAAGCTTACCCCAATTTTCACATATCAGTAGGAAGAAAGGTTATAGAGATACGCCCAAATATAAGTTGGGATAAAGGTTGTGCTGTGCAGTATTTGCTTGGCACTCTTGGCTTTGACAGCTTTGACAAGGTCATACCACTGTACATAGGGGATGATACAACTGATGAGGACGCCTTTAAGATTGTTAGACACATTGGACAAGGTTTTCCAATCATTGTTTCGTCAAAAGCAAAGGAGACCAAAGCTTCCTATTCTCTGCGTGATCCAGATGATGTTCTGTCTTTCTTAATACGTCTTGCTAAGTGGGGGAAAAGCTTGATATAG 972 0.4074 MGFEIQSSAYSNLQSILVSELQENKEAILCSYASWLEKHPSALDKFEEMMSIAKDKEIVVFLDYDGTLSPIVDDPDRANMTDAMRTAVNEVACCFPTAIVSGRSRKKVREFVRLRNIYYAGSHGMDISTPKGSSKAEDQKHQTRAVDEKGNQVVHFHPAGEFLPTIKEIIQVLKENVLTVNGSKIEDNMFCITVHYRLVKNEKEIEILRKMVESIMEAYPNFHISVGRKVIEIRPNISWDKGCAVQYLLGTLGFDSFDKVIPLYIGDDTTDEDAFKIVRHIGQGFPIIVSSKAKETKASYSLRDPDDVLSFLIRLAKWGKSLI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2504 323 NCBIfam trehalose-phosphatase 58 316 IPR003337 GO:0003824|GO:0005992
Prci12g2504 323 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 27 320 IPR044651 GO:0004805|GO:0005992
Prci12g2504 323 Pfam Trehalose-phosphatase 61 305 IPR003337 GO:0003824|GO:0005992
Prci12g2504 323 CDD HAD_TPP 59 308 - -
Prci12g2504 323 SUPERFAMILY HAD-like 59 318 IPR036412 -
Prci12g2504 323 NCBIfam HAD-IIB family hydrolase 60 282 IPR006379 -
Prci12g2504 323 Gene3D - 58 157 IPR023214 -
Prci12g2504 323 Gene3D - 164 322 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2504 Prci-Chr12 42593631 42599460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2504 60 316 Trehalose Biosynthesis Gene Families AT1G23870 25.547 8.33e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2504 K01087 - gmx:100799466 441.039