Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2501 ATGAACATGAGACTTGAGAGTTGGAACAAGATATTACTAATGACATGTGTGATGGCACTTCCTGTTGATCCACTATTCTTTTACATCCCAGAGATTGACGGCAAGCGAAAATGCCTTGTTTTGGATAGGCCATTGACCATTACCATTTGTTCTCTTCGCACGTTCCTTGATCTTTTCTACATCATTCTCCACGCAATGCTTCAGTTTCGAGCTGGTTTTATCGCCCCTTCTTCTCGAATATTAGGTTCGGATGTGCTCGTTGTTGATCCTCAGGCTGTTGCAAAGAGATACTTATCATCAAAATTCATCATTGACATCCTATCAATTATTCCACTTCCCCAGCTTTTTGCTTTAGCCATCATCCCGATCACAAATTCAGCAATTCCATGTATAGCAAAAGAGTGCTTGAAGTACATAGTAGTAGTCCAGTACGTCCCAAGAATTGTTCGGATCTATCCGTTATTCAGCGAAGTGACTAGAACTTCTGGCATACTTACAAAGACAGCATGGGCTGGTGCTGCTTACAATCTCCTCCTTTATATGCTAGCAAGTCATGTGGTTGGAGCTTTTTGGCACCTATTTTCGGTAGAATCAGAGATTCAATGCTGGAGCCAAGAATTGAAGAATGCGAATCTATCAGCGGCTTCATACATGAGCTGTGGACATCATAATTCAACTGTCATATCACTTCTCAATAATGCTTGCCCCCTCATTTATCCTGATGATATTGACCACCTCGGAGTGTTTAATTTTGGAATATTTGTCGATGCTCTAAGATCCCGTGTGGTGGAATCAACAACCAATTTTCCTAAAAAGATTTTCTATTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTCTCGGGCAAAACCTCAAAACAAGTACATCTATTGAGGAAATCATCTTCACTATCTTCATTGCAATCTTCGGGTTGGTTTTATTCTCGTTCCTCATTGGAAACATACAGAAATATCTACAATCCATGCAATCTACGGCCATTAGCGCCGAAGAAATGAGAGTGAAAAGACAGATTATGGAGAAATGGATGTCCAACCGTAAGTTGCCTGTGAGCTTGAGGGAAAGAATCATGCAGTATGAACATTACAAATGGCAACAACACGAGGGTGTGGATGAGGAAACACTAATCAACAGTCTTCCCAAAGATCTTAGAAGGGACATAAAGCGTCACCTTTGCTTTGATTTACTTAAACAAGTGCCCATGTTTGAGCAAATGGAGGAGCAGTTGTTGGATGCACTTTGTGATAGGCTGAGGTCAGTTCTTTATACAGAGAAGAGCTACATTTTTCGCGAAGGAGATCAAATCGATCAAATGCTCTTCATTCTGCGAGGAAGCCTCTCTACCATGACAACCAATGGTCGAACAACTGGTTTCTTCAACACCTTCGTCATGAAAGCAGGTGACTTCTGCGGAGAGGAGCTTTTTCCATGGGCCTTGGATCCCAACTCCTCAATTCTTCCCATTTCAACTAGAACTGTAGTATCTATATCAAAAGCTGAAGCCTTTGCTCTCACCGCTAATGACTTGAAGTTCGTCGCTTCCCAATTTCGACAACTTCACAGCAAACACGTCCACCACACTTTTAGGCTACTTTTTCTGCAGGTACCATTCCCTGCAATGGAGAACATGGGCTGCGTGTTTCATACAAGCAACTTGGCGTCGCCACCTCAGGGTTAA 1695 0.4224 MNMRLESWNKILLMTCVMALPVDPLFFYIPEIDGKRKCLVLDRPLTITICSLRTFLDLFYIILHAMLQFRAGFIAPSSRILGSDVLVVDPQAVAKRYLSSKFIIDILSIIPLPQLFALAIIPITNSAIPCIAKECLKYIVVVQYVPRIVRIYPLFSEVTRTSGILTKTAWAGAAYNLLLYMLASHVVGAFWHLFSVESEIQCWSQELKNANLSAASYMSCGHHNSTVISLLNNACPLIYPDDIDHLGVFNFGIFVDALRSRVVESTTNFPKKIFYCFWWGLRNLSSLGQNLKTSTSIEEIIFTIFIAIFGLVLFSFLIGNIQKYLQSMQSTAISAEEMRVKRQIMEKWMSNRKLPVSLRERIMQYEHYKWQQHEGVDEETLINSLPKDLRRDIKRHLCFDLLKQVPMFEQMEEQLLDALCDRLRSVLYTEKSYIFREGDQIDQMLFILRGSLSTMTTNGRTTGFFNTFVMKAGDFCGEELFPWALDPNSSILPISTRTVVSISKAEAFALTANDLKFVASQFRQLHSKHVHHTFRLLFLQVPFPAMENMGCVFHTSNLASPPQG 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2501 564 Gene3D Helix hairpin bin 333 398 - -
Prci12g2501 564 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 533 - -
Prci12g2501 564 Pfam Ion transport protein 7 331 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci12g2501 564 Gene3D - 38 329 - -
Prci12g2501 564 SUPERFAMILY Voltage-gated potassium channels 7 327 - -
Prci12g2501 564 ProSiteProfiles cAMP/cGMP binding motif profile. 407 478 IPR000595 -
Prci12g2501 564 SUPERFAMILY cAMP-binding domain-like 336 529 IPR018490 -
Prci12g2501 564 CDD CAP_ED 407 537 IPR000595 -
Prci12g2501 564 Gene3D Jelly Rolls 405 524 IPR014710 -
Prci12g2501 564 SMART cnmp_10 407 537 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2501 Prci-Chr12 42550598 42554236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2501 5 535 Ion Channels AT5G53130 61.726 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2501 K05391 - gmx:100795201 708.753