Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2499 ATGGAGCCATTGACCATTACCATTTGTTCTCTTCGCACGTTCCTTGATCTTTTCTACATCATTCTCCACGCAATGCTTCAGTTTCGAGCTGGTTTTATCGCCCCTTCTTCTCGAATATTAGGTTCGGATGTGCTCGTTGTTGATCCTCAGGCTGTTGCAAAGAGATACTTATCATCAAAATTCATCATTGACATCCTATCAATTATTCCACTTCCCCAGCTTTTTGCTTTAGCCATCATCCCGATCACAAATTCAGCAATTCCATGTATAGCAAAAGAGTGCTTGAAGTACATAGTAGTAGTCCAGTACGTCCCAAGAATTGTTCGGATCTATCCGTTATTCAGCGAAGTGACTAGAACTTCTGGCATACTTACAAAGACAGCATGGGCTGGTGCTGCTTACAATCTCCTCCTTTATATGCTAGCAAGTCATGTGGTTGGAGCTTTTTGGCACCTATTTTCGGTAGAATCAGAGATTCAATGCTGGAGCCAAGAATTGAAGAATGCGAATCTATCAGCGGCTTCATACATGAGCTGTGGACATCATAATTCAACTGTCATATCACTTCTCAATAATGCTTGCCCCCTCATTTATCCTGATGATATTGACCACCTCGGAGTGTTTAATTTTGGAATATTTGTCGATGCTCTAAGATCCCGTGTGGTGGAATCAACAACCAATTTTCCTAAAAAGATTTTCTATTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTCTCGGGCAAAACCTCAAAACAAGTACATCTATTGAGGAAATCATCTTCACTATCTTCATTGCAATCTTCGGGTTGGTTTTATTCTCGTTCCTCATTGGAAACATACAGAAATATCTACAATCCATGCAATCTACGGCCATTAGCGCCGAAGAAATGAGAGTGAAAAGACAGATTATGGAGAAATGGATGTCCAACCGTAAGTTGCCTGTGAGCTTGAGGGAAAGAATCATGCAGTATGAACATTACAAATGGCAACAACACGAGGGTGTGGATGAGGAAACACTAATCAACAGTCTTCCCAAAGATCTTAGAAGGGACATAAAGCGTCACCTTTGCTTTGATTTACTTAAACAAGTGCCCATGTTTGAGCAAATGGAGGAGCAGTTGTTGGATGCACTTTGTGATAGGCTGAGGTCAGTTCTTTATACAGAGAAGAGCTACATTTTTCGCGAAGGAGATCAAATCGATCAAATGCTCTTCATTCTGCGAGGAAGCCTCTCTACCATGACAACCAATGGTCGAACAACTGGTTTCTTCAACACCTTCGTCATGAAAGCAGGTGACTTCTGCGGAGAGGAGCTTTTTCCATGGGCCTTGGATCCCAACTCCTCAATTCTTCCCATTTCAACTAGAACTGTAGTATCTATATCAAAAGCTGAAGCCTTTGCTCTCACCGCTAATGACTTGAAGTTCGTCGCTTCCCAATTTCGACAACTTCACAGCAAACACGTCCACCACACTTTTAGGTACCATTCCCTGCAATGGAGAACATGGGCTGCGTGTTTCATACAAGCAACTTGGCGTCGCCACCTCAGGGTTAAGATTGCGAAAACATTACGCGAAGAAGAAGCAGCTTTGGCAGATGAACAAGGGTCATCAGCAACCAGTCTGAGTCTGGGTGCTGCCATATATGCATCCGTGTTTGTCAGCAATCTCACGCTGCGAAGCTGGCGAACACGTGGCGAGCAAAACCAGAGTTTTCTTTTGAGACTGCCTCCGAAGCCGGACGAGCCTGATTTCTCAACTTGCAATTGA 1770 0.4333 MEPLTITICSLRTFLDLFYIILHAMLQFRAGFIAPSSRILGSDVLVVDPQAVAKRYLSSKFIIDILSIIPLPQLFALAIIPITNSAIPCIAKECLKYIVVVQYVPRIVRIYPLFSEVTRTSGILTKTAWAGAAYNLLLYMLASHVVGAFWHLFSVESEIQCWSQELKNANLSAASYMSCGHHNSTVISLLNNACPLIYPDDIDHLGVFNFGIFVDALRSRVVESTTNFPKKIFYCFWWGLRNLSSLGQNLKTSTSIEEIIFTIFIAIFGLVLFSFLIGNIQKYLQSMQSTAISAEEMRVKRQIMEKWMSNRKLPVSLRERIMQYEHYKWQQHEGVDEETLINSLPKDLRRDIKRHLCFDLLKQVPMFEQMEEQLLDALCDRLRSVLYTEKSYIFREGDQIDQMLFILRGSLSTMTTNGRTTGFFNTFVMKAGDFCGEELFPWALDPNSSILPISTRTVVSISKAEAFALTANDLKFVASQFRQLHSKHVHHTFRYHSLQWRTWAACFIQATWRRHLRVKIAKTLREEEAALADEQGSSATSLSLGAAIYASVFVSNLTLRSWRTRGEQNQSFLLRLPPKPDEPDFSTCN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2499 589 CDD CAP_ED 366 496 IPR000595 -
Prci12g2499 589 SUPERFAMILY Voltage-gated potassium channels 20 286 - -
Prci12g2499 589 Gene3D Helix hairpin bin 292 357 - -
Prci12g2499 589 SUPERFAMILY cAMP-binding domain-like 295 487 IPR018490 -
Prci12g2499 589 Gene3D Jelly Rolls 364 483 IPR014710 -
Prci12g2499 589 ProSiteProfiles cAMP/cGMP binding motif profile. 366 437 IPR000595 -
Prci12g2499 589 SMART cnmp_10 366 496 IPR000595 -
Prci12g2499 589 Gene3D - 5 288 - -
Prci12g2499 589 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 585 - -
Prci12g2499 589 Pfam Ion transport protein 8 290 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2499 Prci-Chr12 42550387 42554224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2499 4 587 Ion Channels AT5G53130 60.202 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2499 K05391 - gmx:100797784 728.398