Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2457 ATGGGAAGAGCTCCTTGCTGCGCAAAAGTGGGGCTGCACAGAGGGCCATGGACTCCTAAAGAAGATGCATTGCTTACCAAGTACATCCAAGCTCATGGCGAAGGCCAATGGAGATCCTTACCAAAACGAGCTGGGCTTTTGAGGTGTGGGAAAAGTTGCAGGCTGAGATGGATGAACTATCTCAGACCAGACATAAAGAGAGGCAACATAACGCCCGAAGAAGACGATCTCATCATTCGAATGCACTCGCTTCTCGGAAATCGATGGTCTCTCATCGCAGGAAGATTGCCCGGCAGAACAGATAACGAAATCAAGAACCACTGGAACACCCATCTCAGCAAGAGGCTTCGCAACCAAGGAACCGACCCCATCACTCACAAGAAGCTCTCGTCCCTTCCAGCTTCCCCAGATCGTAATCACGCTTCCAGGAAGAAACTGCCCAGGAAGAAGAAGAAAGGCAAGGCGCGTGAGAATGGAGCGCAGGCAGAGAAAGATGAGTTGGAGAAGAAGACGATAGTGTATCTGCCCAAGCCCATCAGGATCTCGGCCTGCTTGTCTTCTTCGATTCCCCGGAGCGATAGTAACCAGAACTTGAACTCGTTTGATTCCAACTCGGCCAGCGGATCTACCAGCCAAGAGAAGAAAGGGAACGCCTGGGGAGAGAATAATAACAACAATAACTATAGTGATTATAATTATAATTATACTTATTGTGGTGACGAAGAAGATCAGGGGTTTGTGGGGTTGCTCGAGGAAGAGCATGAGCTGGTCAACGGGTCTGACATGGAGGGGCAGTCGGAGTTTCCAACGTCGGCGGAGCAGCACGGGACGCTCGAGAAGCTGTACGAGGAATACTTCCAGCTCTTGAATAACCAAGAAAGCCAAGAGGAACTAGAGTCTTTTGCTGAATCCTTGCTGGTTTGA 924 0.4989 MGRAPCCAKVGLHRGPWTPKEDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNHWNTHLSKRLRNQGTDPITHKKLSSLPASPDRNHASRKKLPRKKKKGKARENGAQAEKDELEKKTIVYLPKPIRISACLSSSIPRSDSNQNLNSFDSNSASGSTSQEKKGNAWGENNNNNNYSDYNYNYTYCGDEEDQGFVGLLEEEHELVNGSDMEGQSEFPTSAEQHGTLEKLYEEYFQLLNNQESQEELESFAESLLV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2457 307 FunFam MYB transcription factor 68 129 - -
Prci12g2457 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci12g2457 307 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci12g2457 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci12g2457 307 FunFam Myb transcription factor 11 67 - -
Prci12g2457 307 Gene3D - 14 66 - -
Prci12g2457 307 CDD SANT 16 61 IPR001005 -
Prci12g2457 307 MobiDBLite consensus disorder prediction 110 164 - -
Prci12g2457 307 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 228 - -
Prci12g2457 307 MobiDBLite consensus disorder prediction 187 226 - -
Prci12g2457 307 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci12g2457 307 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Prci12g2457 307 Gene3D - 69 130 - -
Prci12g2457 307 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci12g2457 307 CDD SANT 71 112 IPR001005 -
Prci12g2457 307 SMART sant 13 63 IPR001005 -
Prci12g2457 307 SMART sant 66 114 IPR001005 -
Prci12g2457 307 Coils Coil 150 170 - -
Prci12g2457 307 MobiDBLite consensus disorder prediction 113 128 - -
Prci12g2457 307 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2457 Prci-Chr12 42194649 42195979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2457 1 137 MYB Transcription Factor Family AT4G38620 68.613 4.86e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci12g2457 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2457 K09422 - gmx:778044 365.155