Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2446 ATGAATCCGGATGCTGCAGACAATGGACATAGGGCAAGGAAGCCTCCCGAGTACGAGGAAGATTTTGTAGAGAAAGATCCTACTGGCCGCTATATTCGGTACAATGAAATCTTGGGCAAGGGTGCCTTCAAGACTGTTTATAGGGGATTTGATGAAGTTAATGGGATAGAAGTTGCTTGGAACCGAATTAGGATTGATGATCTCCAGCAGTCGGCAGAAGATTTATCAAAATTATATTCTGAAGTTCATCTTTTGAAGTCTTTAAAGCATGAAAATATCATTAAGTTCTATAATTCCTGGATTGATGACAAGAAGAAAACTGTTAACATGATTACTGAGCTCTTCACCTCTGGAAATTTGAGGCAATACCGTGTGAGGCATAGATCTGTTGACATGAAAGCTATAAAGAATTGGGCTAGACAGATTCTTCGAGGCTTAGCATATCTACATGGTCACAAGCCTCCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAGGTTAAAATAGGAGACCTTGGCCTGGCAATTATCTTGAAGCAGTCAACAGCTCGCAGTGTCATTGGCACTCCCGAGTTTATGGCTCCAGAGCTATATGAAGAAGAGTACAATGAACTTGTTGACATCTATTCTTTTGGGATGTGCATGTTAGAGATGGTTAATTTAGAGTATCCCTATATTGAGTGTAAAAATCCAGCTCAGATCTTTAAAAAAGTTACTTCTGGCATCAAGCCTGCTTCGCTTAGTAAAGTGAAGGACTCTCAAATTAAGGAGTTCATTGAAAAATGCATTGTTTCAGCCTCTCAGAGATTGTCTGCAGAGGAGCTCCTCAAAGATCCATTTCTCCAAGTTGAGAGTCCAAGGGGACCAATCCGGGATCCTCTGCATTTACCTTGTCAAAACCCAAAAGCTATGGATATGTCTAATTCTGATCCTCTCTCTATGGACATAGATGTTGAATACAAACAGACTTTCAAGAGTATAAACACAGATAGTAACTCTGGAAGTCCTCGTAGTCCCGTTCTAGAATTTCAGAGGACATATAAGAACAATGAATTTAGGTTAAAAGGGACCAAAAATGATGATACCTCAATATCATTGACATTGCGTATTGCTGATTCAGATGGTCAGGTGAGGAATATACATTTTCTCTTTTACCTTGATTCAGATACTGCGCTCTCCGTTGCCTCAGAGATGGTTGAGCAACTAGAGCTGGCAAATCATGATGTTGTCTTCATAGCTGAGCTTATTGATTATTTGATTATGAGACTTATGCCAGGGTGGAAGCCCTCTTCTGATTATTCCTCAAGTGGAGGAGTAAGTCTCAGCGGGGGTTCTCCGATACTTAGGGATGGACAAACTATAACAGCATGCCCATGGGATTCTATTCCAGATAGTGTTCCCTCTGGATGGCGTAATGATCAAAAGACTTTGTATGACAATGTTGATAATGCCAATTTTCAGACTTATTTTTCATCTTCTCTTGGTTTGACTAACTTGGAAGATCAACAATCACTGGGAACTGCAACTTCCGAGATAGCTGTGGAAAGCACGTCTGTGCAAAGCTTATGTCTATCCACCTCAAAGTTGGAGCCAGGACATACACATTTCGAGCACAGTACCAATGTTGAAGAGGACATAGTGATGAATAAATTCAGAGAGAACTCAAAGCCAGCAACTCCAGTGTTTAGCCCGGCGTCTAATATTTTGAGCTTGACAAGTAACTGTTCTCTTCTATCCTTGGCAGAAAAAGATACTGATGTTGAGCTAAAGCTGGAACTTGATGCAATTGAGGCACAGTATCAGCAATGGTTTGAGGAGCTTTCTAGGATGAAATTGGAAGCATTAGAAGCCACCAGGAAGAGATGGTCTAACAAGAAAAAGTTGGCCGCTCACTGA 1920 0.4078 MNPDAADNGHRARKPPEYEEDFVEKDPTGRYIRYNEILGKGAFKTVYRGFDEVNGIEVAWNRIRIDDLQQSAEDLSKLYSEVHLLKSLKHENIIKFYNSWIDDKKKTVNMITELFTSGNLRQYRVRHRSVDMKAIKNWARQILRGLAYLHGHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIILKQSTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVNLEYPYIECKNPAQIFKKVTSGIKPASLSKVKDSQIKEFIEKCIVSASQRLSAEELLKDPFLQVESPRGPIRDPLHLPCQNPKAMDMSNSDPLSMDIDVEYKQTFKSINTDSNSGSPRSPVLEFQRTYKNNEFRLKGTKNDDTSISLTLRIADSDGQVRNIHFLFYLDSDTALSVASEMVEQLELANHDVVFIAELIDYLIMRLMPGWKPSSDYSSSGGVSLSGGSPILRDGQTITACPWDSIPDSVPSGWRNDQKTLYDNVDNANFQTYFSSSLGLTNLEDQQSLGTATSEIAVESTSVQSLCLSTSKLEPGHTHFEHSTNVEEDIVMNKFRENSKPATPVFSPASNILSLTSNCSLLSLAEKDTDVELKLELDAIEAQYQQWFEELSRMKLEALEATRKRWSNKKKLAAH 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2446 639 Gene3D Phosphorylase Kinase; domain 1 16 113 - -
Prci12g2446 639 MobiDBLite consensus disorder prediction 1 20 - -
Prci12g2446 639 CDD STKc_WNK 30 289 - -
Prci12g2446 639 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 629 - -
Prci12g2446 639 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2446 639 FunFam probable serine/threonine-protein kinase WNK9 115 294 - -
Prci12g2446 639 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2446 639 SUPERFAMILY Protein kinase-like (PK-like) 26 291 IPR011009 -
Prci12g2446 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Prci12g2446 639 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Prci12g2446 639 Coils Coil 601 621 - -
Prci12g2446 639 FunFam Probable serine/threonine-protein kinase WNK1 17 113 - -
Prci12g2446 639 Gene3D - 370 438 - -
Prci12g2446 639 SMART serkin_6 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2446 639 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 372 428 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2446 Prci-Chr12 42114951 42118958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2446 19 639 MAP Kinase Kinase Kinase AT5G41990 48.071 7.83e-179 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci12g2446 Pkinase 9.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2446 K08867 - qsa:O6P43_027404 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2446 12 42114951 42118958 Prci12g2446 12 42114951 42118958 ECH