Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2445 ATGATTACTGAGCTCTTCACCTCTGGAAATTTGAGGCAATACCGTGTGAGGCATAGATCTGTTGACATGAAAGCTATAAAGAATTGGGCTAGACAGATTCTTCGAGGCTTAGCATATCTACATGGTCACAAGCCTCCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAGGTTAAAATAGGAGACCTTGGCCTGGCAATTATCTTGAAGCAGTCAACAGCTCGCAGTGTCATTGGCACTCCCGAGTTTATGGCTCCAGAGCTATATGAAGAAGAGTACAATGAACTTGTTGACATCTATTCTTTTGGGATGTGCATGTTAGAGATGGTTAATTTAGAGTATCCCTATATTGAGTGTAAAAATCCAGCTCAGATCTTTAAAAAAGTTACTTCTGGCATCAAGCCTGCTTCGCTTAGTAAAGTGAAGGACTCTCAAATTAAGGAGTTCATTGAAAAATGCATTGTTTCAGCCTCTCAGAGATTGTCTGCAGAGGAGCTCCTCAAAGATCCATTTCTCCAAGTTGAGAGTCCAAGGGGACCAATCCGGGATCCTCTGCATTTACCTTGTCAAAACCCAAAAGCTATGGATATGTCTAATTCTGATCCTCTCTCTATGGACATAGATGTTGAATACAAACAGACTTTCAAGAGTATAAACACAGATAGTAACTCTGGAAGTCCTCGTAGTCCCGTTCTAGAATTTCAGAGGACATATAAGAACAATGAATTTAGGTTAAAAGGGACCAAAAATGATGATACCTCAATATCATTGACATTGCGTATTGCTGATTCAGATGGTCAGGTGAGGAATATACATTTTCTCTTTTACCTTGATTCAGATACTGCGCTCTCCGTTGCCTCAGAGATGGTTGAGCAACTAGAGCTGGCAAATCATGATGTTGTCTTCATAGCTGAGCTTATTGATTATTTGATTATGAGACTTATGCCAGGGTGGAAGCCCTCTTCTGATTATTCCTCAAGTGGAGGAGTAAGTCTCAGCGGGGGTTCTCCGATACTTAGGGATGGACAAACTATAACAGCATGCCCATGGGATTCTATTCCAGATAGTGTTCCCTCTGGATGGCGTAATGATCAAAAGACTTTGTATGACAATGTTGATAATGCCAATTTTCAGACTTATTTTTCATCTTCTCTTGGTTTGACTAACTTGGAAGATCAACAATCACTGGGAACTGCAACTTCCGAGATAGCTGTGGAAAGCACGTCTGTGCAAAGCTTATGTCTATCCACCTCAAAGTTGGAGCCAGGACATACACATTTCGAGCACAGTACCAATGTTGAAGAGGACATAGTGATGAATAAATTCAGAGAGAACTCAAAGCCAGCAACTCCAGTGTTTAGCCCGGCGTCTAATATTTTGAGCTTGACAAGTAACTGTTCTCTTCTATCCTTGGCAGAAAAAGATACTGATGTTGAGCTAAAGCTGGAACTTGATGCAATTGAGGCACAGTATCAGCAATGGTTTGAGGAGCTTTCTAGGATGAAATTGGAAGCATTAGAAGCCACCAGGAAGAGATGGTCTAACAAGAAAAAGTTGGCCGCTCACTGA 1593 0.4112 MITELFTSGNLRQYRVRHRSVDMKAIKNWARQILRGLAYLHGHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIILKQSTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVNLEYPYIECKNPAQIFKKVTSGIKPASLSKVKDSQIKEFIEKCIVSASQRLSAEELLKDPFLQVESPRGPIRDPLHLPCQNPKAMDMSNSDPLSMDIDVEYKQTFKSINTDSNSGSPRSPVLEFQRTYKNNEFRLKGTKNDDTSISLTLRIADSDGQVRNIHFLFYLDSDTALSVASEMVEQLELANHDVVFIAELIDYLIMRLMPGWKPSSDYSSSGGVSLSGGSPILRDGQTITACPWDSIPDSVPSGWRNDQKTLYDNVDNANFQTYFSSSLGLTNLEDQQSLGTATSEIAVESTSVQSLCLSTSKLEPGHTHFEHSTNVEEDIVMNKFRENSKPATPVFSPASNILSLTSNCSLLSLAEKDTDVELKLELDAIEAQYQQWFEELSRMKLEALEATRKRWSNKKKLAAH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2445 530 Gene3D Transferase(Phosphotransferase) domain 1 6 185 - -
Prci12g2445 530 FunFam probable serine/threonine-protein kinase WNK9 6 185 - -
Prci12g2445 530 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 263 319 IPR024678 GO:0004674|GO:0005524
Prci12g2445 530 SUPERFAMILY Protein kinase-like (PK-like) 1 181 IPR011009 -
Prci12g2445 530 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2445 530 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 521 - -
Prci12g2445 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Prci12g2445 530 Coils Coil 492 530 - -
Prci12g2445 530 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2445 530 Gene3D - 261 329 - -
Prci12g2445 530 Pfam Protein kinase domain 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2445 Prci-Chr12 42114951 42118958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2445 1 530 MAP Kinase Kinase Kinase AT5G41990 44.821 8.68e-127 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci12g2445 Pkinase 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2445 K08867 - jre:108986606 654.055