Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2426 ATGAGCATGAATGCAGCGAAATCTCGGACTCGCGTGGGAAAATACGAGCTGGGTAAAACCATTGGCGAGGGTAGCTTCGCCAAGGTGAAGTTTGCGAGAAACGTTGAGACGGGACAGCACGTCGCCATCAAAATCCTCGACCGCAATCATGTGCTTCGACACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACGATGAAGCTGATCAAACACCCGAATGTTGTTAATATATTTGAGGTAATGGCAAGCAAAACAAAGATTTACATTGTCCTGGAGTTTGTTGATGGTGGAGAACTATTTGACAAAATAGCTAACGATGGGAGACTTAAGGAGAGTGAAGCAAGGCAATATTTCCAACAACTTATTAATGCTGTTGATTACTGCCATAGTAGAGGTGTCTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCGAATGATATTCTTAAAGTTTCAGATTTTGGACTGAGTACATACTCCCAGCAAGATGATGCACTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGCTAAAGGCTATGATGGTTCAGCAGCTGATATTTGGTCATGTGGTGTGATTCTCTTTGTTCTGATGGCTGGGTACTTGCCGTTTGATGAGCCAAATCAAATGGCTTTGTATAAGAAAATCAGCAAGGCTGAATTCTCATACCCATCATGGTTTCCACCAGATGTAAAGAAACTGCTGAATCGTATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTCCAGAACTCTTGGGAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCCAAGGAAAACCTTGTGACAGAGAGGAAAGAAAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCCCAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGATGGGTATTGTCAAGCGAGAAACAAGATTTACTTCTCAGCGCCCTGCACATGAAATTATTTCTAAAATCGAGGAAGCTGCCAAACCACTGGGATTTAATGTTCACAGGCGAAACTACAAGATGAAGCTTCAAGGTGACAAGACTGGAAGGAAGGGACACCTCTCTGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCGTTGCACATGGTGGAGTTGCGGAAGACGGGGGGTGACACACTGGAGTTTCACAAGTTCTACAAAAACTTCTCGTCAGGTTTGCAAGACGTAGTGTGGCACACTGAAGGAAAAAATGGAGGAAAACTTGAACAATCAAGCTAG 1332 0.4347 MSMNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETGQHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVDGGELFDKIANDGRLKESEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNDILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNAKGYDGSAADIWSCGVILFVLMAGYLPFDEPNQMALYKKISKAEFSYPSWFPPDVKKLLNRILDPNPLTRIKIPELLGDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEKEMGIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKTGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDVVWHTEGKNGGKLEQSS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2426 443 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Prci12g2426 443 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Prci12g2426 443 Pfam NAF domain 307 366 IPR004041 GO:0007165
Prci12g2426 443 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Prci12g2426 443 Gene3D Kinase associated domain 1, KA1 304 430 - -
Prci12g2426 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Prci12g2426 443 Gene3D Transferase(Phosphotransferase) domain 1 95 293 - -
Prci12g2426 443 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2426 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 415 - -
Prci12g2426 443 CDD CIPK_C 311 424 - -
Prci12g2426 443 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Prci12g2426 443 SUPERFAMILY Protein kinase-like (PK-like) 12 282 IPR011009 -
Prci12g2426 443 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Prci12g2426 443 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2426 443 FunFam Non-specific serine/threonine protein kinase 8 308 - -
Prci12g2426 443 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2426 Prci-Chr12 41849112 41854803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2426 8 433 CBL-interacting serine-threonine protein kinases AT1G01140 75.520 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci12g2426 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2426 - - pcin:129288537 891.338