Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2418 ATGTTGATAATGTCGCAACAAAGGCAATTCCAGATGGTGGGAGGGCAATACAACGACACAACATTGACAAAAATCTTCGTGGGAGGGCTAGCCTGGGAGACTCAGAGGGACACAATGAGCAGGTATTTTGAGCAGTTCGGGGAGATCCTTGAAGCTGTTGTTATCACAGACAAGAACACAGGGAGATCCAAGGGTTATGGCTTTGTCACGTTTAAGGATCCGGAAGCAGCCATGCGAGCATGTCAGAATCCTTCTCCAGTTATTGATGGCAGAAGAGCAAACTGCAATCTCGCTTCTCTTGGTGCAAACAAGAATCGGCCTCCAACTCCTCAAGCTGGTGCAGGAAGGTTCGGGGCAGCACCTGAACTGGTGGGCATGCCTGCATATCATGGCTCTTCGCCCACAATTTGCCGTCAACCCACTGGGCAATACACATTTCCATATTCAGCTTACGGTTACAAATACGCTGGATATTCAGAAGACTCCATGTATCCCTTGAATTATTATAGTGTGTATGGAGGTCAACAATTTTCACCATACTATTCATCCAGTGGGGCATCTGGGGTAGCAGGGTTAATGAGTAATATTTACCCATTCTATACTCAATATGCACAGAGTGGCCAAGTTCATGGTTTTGGAGTTCACTATCCTCAAATGGTACACTTCCCACTTCTTCATCAACACCACTATGCCACTGCCTCTCCTCCAGTCCCATCATTTTCTTCTTCAATGCCAATGCCAGCCACTAGCGAAGTGGCAGCATCAGTAGGGGCAGGAGCTTCACAAGTCTCTGCAGTAAAAGCTTCAGAGCAGAACTCTTCAACTTAA 828 0.4686 MLIMSQQRQFQMVGGQYNDTTLTKIFVGGLAWETQRDTMSRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTPQAGAGRFGAAPELVGMPAYHGSSPTICRQPTGQYTFPYSAYGYKYAGYSEDSMYPLNYYSVYGGQQFSPYYSSSGASGVAGLMSNIYPFYTQYAQSGQVHGFGVHYPQMVHFPLLHQHHYATASPPVPSFSSSMPMPATSEVAASVGAGASQVSAVKASEQNSST 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2418 275 SUPERFAMILY RNA-binding domain, RBD 5 111 IPR035979 GO:0003676
Prci12g2418 275 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 82 IPR000504 GO:0003723
Prci12g2418 275 CDD RRM_RBM24_RBM38_like 23 98 - -
Prci12g2418 275 SMART rrm1_1 24 96 IPR000504 GO:0003723
Prci12g2418 275 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 23 100 IPR000504 GO:0003723
Prci12g2418 275 PANTHER BOULE-RELATED 14 256 - -
Prci12g2418 275 Gene3D - 4 116 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2418 Prci-Chr12 41703092 41705810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2418 19 99 C2H2 Transcription Factor Family AT2G19380 44.444 4.06e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2418 - - qsa:O6P43_018526 375.555