Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2407 ATGGGTGAAGTGGTCGTGGCGACGTGTGAACAGGCGATGGAGGTCGGGTTGGAGACAGAGGAGGATCAGAGCAAGAAGATGGTGCGGTGGGAGAAGTTTTTACCCCGGATGGTGCTTAGAGTATTACTTGTGGAAGCGGATGATTCTACTCGTCATGTTATCGCGGCCCTTCTTCGGAAATGCAGTTACAAAGTGGCTGCGGTTCCTGATGGACTAAAGGCATGGGAGACGTTGAAGCAAAAAGCTTCTGAAATAGATATCATTTTAACTGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTCCTTACTTTAATCATGGAACATGATATATGCAAGAACATTCCTGTCATAATGATGTCTACTCATGATTCAGTTAGTTTGGCATTGAAATGCATTTTGAAAGGTGCAGCTGATTTTCTCATAAAGCCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAAGACATGAGATTAGCCGGCAACCCCAAAATTTGACATTTCTGCAGAAAAAACTGGAAGCTGCTTCTGAAAATGATGCTGCAAGTAGTGGTTCTGTGGCTTCCACACAGAAAAGTAATGGACACCCTGAGAAAGGGAGTGAAGCCCAAGGTACATCCTATGTGAAGAGTTCTTCCAATCTGAGCAACATTGACACGATGCAGCATGAAGACTCAACCATATTGGGATTGGAAAAGCTGTCAGTTAAGCATGACAATGAAGTTGGAGAGAAATCAGTGGCATTGTTATCAACGGCAGCAAAGTTTGACAAGAACTTTAAATCAACAGACTCTGGGCAGGATCACGGACGTGATTGTCCTGAAAAGAAGAATCAAGTTGAAGTTCTTAGAGCAGAGCCAAGCAGAGACAATCCTGATGACACACAGATTCATGAATGCAACCATGGACTGGTAGAAGGAGTTATTGATTTGATTGCCACATTGAAGAATCTACCAGACATTTATGATGAAAGCTGTAATCTCAGTGGTGTTGGTACAAAGAAGGTTGATTTTGATCCACGATTGGAACTTTCTCTAAGACAAGATTTTCCTGGCAGCTCTTCGAAGCAAACGACTGACGAAAAACAGGCATTGAACCATTCAAAGGCTTCTGCCTTTTCTTGGTATAACGGGTGCAAGTTTCCATCACCATTGGGAAGCTCTGCTAAAGCAGGTGGAAACAGGGGGAATTCTTGTGAAGCCAGTAAATTATCCGGAAGAACTGTTGGTACTTCCCGACAATTTGGCGGCACGAATCATACTTCAGAGAATAAGACAACCCTTGACATTGATCGGTTTGTTCAGGTCGAAAGACAGTTGTCAAACAGTCAACTTGGACCATTTCCTGCTGCTGCTGTTACTTCTGATAATAAGCCTACTGGGTACGGATATGGTTTTCCAATGTTCTACGCGCAATCTGATGTTCATTCCACGCAAGTTCCAAAACCTAACTGCCCGAAAGAGAGTTTTCCTTCTCCCATTCTCAAAAGTAACTCTTTCCAGTCCAATCCTGAAAGTTACAATTCAGAACAACGTTATCACTGTTCTGATGATCCCATCTGTACTTCTCGTGATAAAACTGCAAATGAAAAGAGCAATTTGGATCCTGCCGGGCGGCATTCTTCTGCTGTTGATCAGAGCACTAGTAACACCTCATGCCATGATACTGCAAATCAGAATAATAATGATGATGACAATACTAGTGCATATAAACTCGCATGTAAGATTGATGGAAATGCTTCTTCAGCTGCAGTGGTTAAGAGAAACCCTGAAAATTATGGGGACAGTGGCCATAGTTATGATGGATATAGAGGGACAGATTCTCATTGTCCCAGCCAAAGAGAAGCTGCTCTAACGAAGTTCCGAATGAAGCGGAAAGAGAGGTGCTATGAGAAAAAGGTCCGATATCTAAGCAGGAAAAGACTAGCAGAACAGCGTCCTCGGGTTAAAGGGCAGTTTGTGCGCCAGATGCATAATGATGATCATCCCGTTGCTGATGTTGATGGTGGTTCCTGA 2028 0.4339 MGEVVVATCEQAMEVGLETEEDQSKKMVRWEKFLPRMVLRVLLVEADDSTRHVIAALLRKCSYKVAAVPDGLKAWETLKQKASEIDIILTEVELPSISGFALLTLIMEHDICKNIPVIMMSTHDSVSLALKCILKGAADFLIKPVRRNELRNLWQHVWRRHEISRQPQNLTFLQKKLEAASENDAASSGSVASTQKSNGHPEKGSEAQGTSYVKSSSNLSNIDTMQHEDSTILGLEKLSVKHDNEVGEKSVALLSTAAKFDKNFKSTDSGQDHGRDCPEKKNQVEVLRAEPSRDNPDDTQIHECNHGLVEGVIDLIATLKNLPDIYDESCNLSGVGTKKVDFDPRLELSLRQDFPGSSSKQTTDEKQALNHSKASAFSWYNGCKFPSPLGSSAKAGGNRGNSCEASKLSGRTVGTSRQFGGTNHTSENKTTLDIDRFVQVERQLSNSQLGPFPAAAVTSDNKPTGYGYGFPMFYAQSDVHSTQVPKPNCPKESFPSPILKSNSFQSNPESYNSEQRYHCSDDPICTSRDKTANEKSNLDPAGRHSSAVDQSTSNTSCHDTANQNNNDDDNTSAYKLACKIDGNASSAAVVKRNPENYGDSGHSYDGYRGTDSHCPSQREAALTKFRMKRKERCYEKKVRYLSRKRLAEQRPRVKGQFVRQMHNDDHPVADVDGGS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2407 675 CDD psREC_PRR 41 144 - -
Prci12g2407 675 SUPERFAMILY CheY-like 39 170 IPR011006 -
Prci12g2407 675 Gene3D - 37 229 - -
Prci12g2407 675 MobiDBLite consensus disorder prediction 481 520 - -
Prci12g2407 675 MobiDBLite consensus disorder prediction 538 570 - -
Prci12g2407 675 Pfam Response regulator receiver domain 41 152 IPR001789 GO:0000160
Prci12g2407 675 MobiDBLite consensus disorder prediction 481 570 - -
Prci12g2407 675 ProSiteProfiles CCT domain profile. 618 660 IPR010402 GO:0005515
Prci12g2407 675 SMART REC_2 39 154 IPR001789 GO:0000160
Prci12g2407 675 Pfam CCT motif 618 660 IPR010402 GO:0005515
Prci12g2407 675 MobiDBLite consensus disorder prediction 183 216 - -
Prci12g2407 675 ProSiteProfiles Response regulatory domain profile. 40 158 IPR001789 GO:0000160
Prci12g2407 675 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 318 IPR045279 GO:0009736
Prci12g2407 675 MobiDBLite consensus disorder prediction 521 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2407 Prci-Chr12 41632739 41637947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2407 617 667 Response Regulator Gene Family AT5G24470 80.392 1.44e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Prci12g2407 Response_reg 1.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2407 K12130 - gmx:100779346 654.055