Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2400 ATGGCTCAATCACAACAATCTCATTCTCAGCCCAAGCCTCTTCACGACGCAGGGAACAATCATCCACTGAAGCAACATTCACCAGAAATAGATGACGTCGAAGAAGAGAGCTTCTCCTACGCCATGCAGCTCGCGACTTCTACCGCTATTTCCATGGCCATGCAAACGGCGGTGGAGCTCGGCATCTTCGACGTCATTCACAGAGTTGGTCACGACGCCAGGATGTCAGCCGCCGAGATCGCGACGGAGCTTTCTTGCAAGAACTCCGAAGCGCCTTCCGCGCTCGATCGCCTCCTCTGGCTTCTAGCGTCTCACTCTGTTCTTACCTGTTCCGTCGTGGCCGACGAGGATCAGGGGCAGCGATGTTTCCGACGATTGTACGGCCTCTCTCCGGTGGCCAAATTCTTTGCGCGAAATGCGGAAGGAGTGTCGCTGGGCCCTTTTATTGCTTTGATTCAAGATAAGGTCTTCATTGAGAGCTGGAGGAAACTGAAGGATGCAATATCGGATGGAGGCATCGCGTTCAATAAGGTGCACGGATCACATGCTTTTGAGTATCCAAAATTGGATTCAAGGTTTAACGATGTGTTTAACAAGGCAATGGTAAATCAGACCACCTTGGTGGTGACTAAGATTCTTGAATACTACAAAGGTTTTGGGAACATCACTAGACTCGTCGACGTTGGTGGAGGTCTTGGGATTACTCTCAGCTTGATCACTTCCAAATATCCAAATATTCAAGGAGTGGAACACGTGGGAGGGGATATGTTTGAAAGTGTGCCTAAAGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGACGAGTGGTGCTTGAAGTTATTGAAGAATTGCCATAACGCCATTCCTGAAGATGGAAAAGTGATTGTGGTGGATGCAATTCTGCATGCCGTACCAGAAATTTCTGCTTCTGCCAAGAGCACTTCCCAGCTTGACATGATTATGATGACTCAAAACCCAGGTGGTAGAGAGAGAAGTGAGGAAGAGTTCATGGAATTGGCCAGGTCAGCAGGGTTTAGAGGCGTTAGATATGAGTGTTTTGTTCGTAACTTCTGGATTATGGAATTCTACAAATAG 1104 0.4783 MAQSQQSHSQPKPLHDAGNNHPLKQHSPEIDDVEEESFSYAMQLATSTAISMAMQTAVELGIFDVIHRVGHDARMSAAEIATELSCKNSEAPSALDRLLWLLASHSVLTCSVVADEDQGQRCFRRLYGLSPVAKFFARNAEGVSLGPFIALIQDKVFIESWRKLKDAISDGGIAFNKVHGSHAFEYPKLDSRFNDVFNKAMVNQTTLVVTKILEYYKGFGNITRLVDVGGGLGITLSLITSKYPNIQGVEHVGGDMFESVPKGDAVFMKWILHDWSDEWCLKLLKNCHNAIPEDGKVIVVDAILHAVPEISASAKSTSQLDMIMMTQNPGGRERSEEEFMELARSAGFRGVRYECFVRNFWIMEFYK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2400 367 FunFam Caffeic acid 3-O-methyltransferase 20 136 - -
Prci12g2400 367 PIRSF O-mtase 21 367 IPR016461 GO:0008168
Prci12g2400 367 Pfam O-methyltransferase domain 248 349 IPR001077 GO:0008171
Prci12g2400 367 SUPERFAMILY "Winged helix" DNA-binding domain 33 139 IPR036390 -
Prci12g2400 367 PANTHER O-METHYLTRANSFERASE 41 356 IPR016461 GO:0008168
Prci12g2400 367 MobiDBLite consensus disorder prediction 1 27 - -
Prci12g2400 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 366 IPR029063 -
Prci12g2400 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 42 367 IPR016461 GO:0008168
Prci12g2400 367 Gene3D Vaccinia Virus protein VP39 248 367 IPR029063 -
Prci12g2400 367 Gene3D Vaccinia Virus protein VP39 137 247 IPR029063 -
Prci12g2400 367 Gene3D - 19 136 IPR036388 -
Prci12g2400 367 Pfam Dimerisation domain 52 103 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2400 Prci-Chr12 41575915 41578732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2400 33 367 Monolignol Biosynthesis Gene Families AT5G54160 49.148 1.26e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2400 K13066 - qsa:O6P43_027445 462.611