Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2397 ATGACTTTCGCTGCCTTGGAAGGAATTCTAAGCTTTGTCGTCGCTGCCCTCAATCTACTCACACTTATGATCAGTATCGATATATTGAATGTAGAACTTGCTAGAAGAAGGGACATGTTGCTACAGGACAGGTTATCAGGACTGAGTGTAAGGTTGGTTGAATGTTTGAGCTCAATTCCTTACATGGAGGTCACTTCTTCTAGATTGTGTGCTCCCTCCACTTCTGCTTCCTTTGAACAGAGTGGAAACGTGGGAAGGGGTATGTTTGAAAGTGTGCCTAAAGGAGATGCTATTTTCATAAAGATACTTCATGATTGGAGTGACGAGCGGTGCTTGAAGTTATTGAAGAATTGCCATAATGCCATTCTTGAAGTTGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCCATCGTACCAGAAATTTCTACTTCTGCCAAGAGCACCTCCCAACGTGACATGATTATGATGACTCAGACTCTCAGAGCCCAGGTGGCAGAGAGAGAAGTGAGGAAGAGGTCATGGAATTGGCCAGGTCAGTAG 540 0.4444 MTFAALEGILSFVVAALNLLTLMISIDILNVELARRRDMLLQDRLSGLSVRLVECLSSIPYMEVTSSRLCAPSTSASFEQSGNVGRGMFESVPKGDAIFIKILHDWSDERCLKLLKNCHNAILEVGKVIVVDAVLPIVPEISTSAKSTSQRDMIMMTQTLRAQVAEREVRKRSWNWPGQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2397 179 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 87 158 IPR029063 -
Prci12g2397 179 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 179 IPR016461 GO:0008168
Prci12g2397 179 Gene3D Vaccinia Virus protein VP39 79 158 IPR029063 -
Prci12g2397 179 PANTHER O-METHYLTRANSFERASE 82 167 IPR016461 GO:0008168
Prci12g2397 179 Pfam O-methyltransferase domain 84 160 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2397 Prci-Chr12 41571928 41573159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2397 83 159 Monolignol Biosynthesis Gene Families AT5G54160 52.564 3.23e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2397 K13066 - pcin:129289367 348.591