Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2396 ATGGCCATGCAAATGGCGGTGGAGCTCGACGTCTTCGACGTCATCCACAAAGTTGGTCATGACGCCAAGATGTCCACCGTCGAGATTGCAACAGAGCTTTCTTGCAAGAACTCCAAAGCTTCTGCGCTGGATCGCCTCCTCCGGCTTCTAGTGTCTCACTCTGTTCTTACCTGTTCCGTTATGGCCGACGAGGATCGGGGAAGGACTTTGCTGTTCTCAAAATGGAGAAAGGTGAACTGCTGCTCAAGTTTCTTTTAA 258 0.5078 MAMQMAVELDVFDVIHKVGHDAKMSTVEIATELSCKNSKASALDRLLRLLVSHSVLTCSVMADEDRGRTLLFSKWRKVNCCSSFF 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2396 85 FunFam Caffeic acid 3-O-methyltransferase 1 78 - -
Prci12g2396 85 SUPERFAMILY "Winged helix" DNA-binding domain 1 73 IPR036390 -
Prci12g2396 85 Pfam Dimerisation domain 1 51 IPR012967 GO:0046983
Prci12g2396 85 Gene3D - 1 75 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2396 Prci-Chr12 41569933 41573439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2396 1 59 Monolignol Biosynthesis Gene Families AT5G54160 51.667 1.11e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2396 K13066 - pcin:129289435 153.68