Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci12g2389 | ATGGACGCATACTCCTCAGGAGAAGAAGTGGTTGTTAAGGTAAGGTTAATATCTGGCCGAGAAAAGACAAGAAAACCTTATACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTTTATGGGAGAGCATGGCAGCGTATTGAAGAGCATATAGGAACAAAGACTGCCGTGCAAATCAGGAGCCACGCGCAGAAATTCTTTTCAAAGCTGGAGAAAGAGGCCCTTGAAAAGGGTGTTCCAATAGGTCAAGCTCTTGACATTGACATCCCTCCTCCACGGCCTAAAAGAAAACCAACTAATCCTTATCCTCGGAAGACCAGTACTGGCTCTCCAGCATCACATAATGGAGCAAAGGATCGCAAACTAACGTCAGTTTCACCTCCGCATGGTAAACAAGCACTGGACTTAGAGAAAGAACCACTTCCGGAGAAATGTAATGGAGATGAAAGACCAATAAATGTCACTGAAAATAAGGATGAGAACTGCTCAAGAGTATTTGCTATTCCACAGGCCTGTTCCACTATATCTTCAGCAAAAAACAGATCAATTTCATTGTCAGTACCACTGAGAAACTCATGCATTTTAAGGGAGTTCATACCTTCAGTAAGAGTGGGAATTACTCGAGATGAAACAAATGATTCTTCTGTCACTATTGAACTTGAAAATCAGAAGTGCAAAATAGATGATGGAAAACCAGAACAGACAAAAGCCTCTAAGTTGGAGGGTTCTGATGCTTCAGGTGTGAAATTGGTTCCAAGTCAGAAAACAGATGATCTCAATTGTGCATTAACAACAGATGGGATACAAGACAATCAGAATTACCCAAGGCATGTCCCAGTGCACGGTCTTGATGGGAACCTGGGAACAAGTGCACAAAACCCTCCCCAAGAAATGCTATTACGAGACTCTATATTTCAGCCTGTGGGAGAGCTTAGTGGGCAACCTAATATTTTCACAGATTCAGCTACGTCAAACACAAGTAAGAATAACACACCTCAATGTCCTAGTCATCAAATATTTCCTGCTTGTCCTCCCTTCCCGCAAGTTCTCTGTAGTCAAGATCATTGCCATTCATTTTTTCACATGTCCTCCACATTTTCAAGCCTCATTGTCTCCACCCTAATGCAAAATCCTGCAGCCCATGCTGCAGCTAGTTTTGCTGCTACGTTTTGGCCCTATGCAAATGCAGAAGCTTCAGCTGATTCTCTTGCTTCCTCTCAAGGAGGTTTCACATCAAGACAAATTAGCTGTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGACAGCCCATGGACTGCTTCCCTTGTGTGCTCCACTCCATTCTGCTTTCTCCTCTCCTCCTGCATCAGCGGTGGTAGTTTCTTCCATGAATACAGGTGAAGCACCAGCAGCTAGAAAAGATCAGAAAGAGACTACAGTTGAGAATCCTCCTCTGCTAGATCAGCTGCCAAATGGAGAATATTCAGAAGCTCTGCAAGCTCAACATTCAGACTCCAAGTCGCAAGCTGTTTCTTCATCAGATTCTAAGAGTGGAGATGCCAAGTTAACCACTTCACCTAAGGCTGCTGAACATGACAAGAATGAAGCAATTTCTGAGCACCTTGATTCTAACAAGACCAACGGAAGAAGACCAGTAGACCGTTCTTCATGTGGCTCCAACACAACCTCTAGTAGTGATATAGAGACAGATGCATTAGAGAAGAATGAGAAAGGGAAGGAAGAGTCCTTAGCACCAGATGCAAACCACTTAACTGAGCCCAGTAACCGCCGTAGTAGGAGTGCTGGCAACCCTACTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGCGACAGGCCTTTCGGGCTCTCTTCTCCAGAGAGGTTTTGCCACAAAGCTTTTCACCACCACTCTTGGAAAAGGACATTCAGAAAGACCACAAAAACGAGGATCACAGGAAGAACATGGTTGACAAAGAGGAAGACCTTGACAGCAACAAATACAGTCCTGATCAGGTAGGAGTAAAGAAGAACATGCCATTCTTAGAATACACACATAAAGAGGAAGGACTTTTAACGATAGGGCTCGGACAAGGAAAGCTTAAGGCATGTCGAACTGGGTTTAAACCTTACAAAAGATGTTCAGCGGAGGCCAAGGAAAATAGGGTTGGAACTACTAGTAACGAAGGTGAAGAGAAACGTCCGAAGAGAATGCGATTGGAGGGGGAGGCTTCCACTTGA | 2274 | 0.4442 | MDAYSSGEEVVVKVRLISGREKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSTGSPASHNGAKDRKLTSVSPPHGKQALDLEKEPLPEKCNGDERPINVTENKDENCSRVFAIPQACSTISSAKNRSISLSVPLRNSCILREFIPSVRVGITRDETNDSSVTIELENQKCKIDDGKPEQTKASKLEGSDASGVKLVPSQKTDDLNCALTTDGIQDNQNYPRHVPVHGLDGNLGTSAQNPPQEMLLRDSIFQPVGELSGQPNIFTDSATSNTSKNNTPQCPSHQIFPACPPFPQVLCSQDHCHSFFHMSSTFSSLIVSTLMQNPAAHAAASFAATFWPYANAEASADSLASSQGGFTSRQISCPPSMAAIAAATVAAATAWWTAHGLLPLCAPLHSAFSSPPASAVVVSSMNTGEAPAARKDQKETTVENPPLLDQLPNGEYSEALQAQHSDSKSQAVSSSDSKSGDAKLTTSPKAAEHDKNEAISEHLDSNKTNGRRPVDRSSCGSNTTSSSDIETDALEKNEKGKEESLAPDANHLTEPSNRRSRSAGNPTDSWKEVSEEGRQAFRALFSREVLPQSFSPPLLEKDIQKDHKNEDHRKNMVDKEEDLDSNKYSPDQVGVKKNMPFLEYTHKEEGLLTIGLGQGKLKACRTGFKPYKRCSAEAKENRVGTTSNEGEEKRPKRMRLEGEAST | 757 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 507 | 535 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 638 | 685 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 727 | 757 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 563 | 581 | - | - | |
Prci12g2389 | 757 | SUPERFAMILY | Homeodomain-like | 27 | 83 | IPR009057 | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 479 | 626 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 143 | 163 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 238 | 262 | - | - | |
Prci12g2389 | 757 | SMART | sant | 32 | 80 | IPR001005 | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 93 | 163 | - | - | |
Prci12g2389 | 757 | ProSiteProfiles | Myb-like domain profile. | 28 | 78 | IPR001005 | - | |
Prci12g2389 | 757 | CDD | SANT | 35 | 78 | IPR001005 | - | |
Prci12g2389 | 757 | Pfam | Myb-like DNA-binding domain | 33 | 76 | IPR001005 | - | |
Prci12g2389 | 757 | PANTHER | SWI/SNF COMPLEX-RELATED | 21 | 640 | - | - | |
Prci12g2389 | 757 | ProSiteProfiles | SANT domain profile. | 31 | 82 | IPR017884 | - | |
Prci12g2389 | 757 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 28 | 82 | IPR017930 | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 651 | 678 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 601 | 620 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 538 | 562 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 582 | 599 | - | - | |
Prci12g2389 | 757 | FunFam | protein REVEILLE 6 isoform X1 | 35 | 83 | - | - | |
Prci12g2389 | 757 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 31 | 80 | IPR006447 | GO:0003677 | |
Prci12g2389 | 757 | Gene3D | - | 35 | 82 | - | - | |
Prci12g2389 | 757 | MobiDBLite | consensus disorder prediction | 112 | 131 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci12g2389 | Prci-Chr12 | 41521278 | 41531673 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Prci12g2389 | Myb_DNA-binding | 2.7e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci12g2389 | K12133 | - | gmx:100101859 | 905.59 |