Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2386 ATGGATTTCGGGGCCCCCAATCAGCCGCGCCTGGTCGGAGAGTACATGCTGGGACCGCAAATCGGGTCGGGTTCCTTCGCGGTGGTGTGGCGCTCAAGGCATCGTCACTCGGGTTTGGAGGTTGCAGTTAAGGAGATTGAGAAGAAACAGCTTAGCCCAAAAGTCAGTGAGAATCTGCTTAAAGAGATTTCTATTCTCAGCACCATCAATCACCCCAACATTATACGATTATTCGAAGCGATCCAGACCAATGATAGGATTTACCTTATTTTGGAGTATTGTAATGGTGGTGACCTTGCTACTTACATTCATCGACGCGGAAAAGTTTCACAACCCATTGCACGGCATTTTATGAGACACTTAGGCTTGATGGTACTCCAAGAAAATCACCTCATTCATAGAGATCTAAAACCTCAGAACTTACTATTGTCTAGCACTGGAGGTTTACCACTTCTAAAAATAGGCGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGGTTGGCAGACACGTTATGTGGTTCACCATTGTACATGGCTCCAGAGATAATTCAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGCGTTGGAGCCATATTGTTCCAGCTAGTGACTGGGAGGCCACCATTTGATGGAAATAATCAATTGCAGCTTTTTCAGAACATTTTAACATCCACTGAACTGCAGTTCCCACAAGAGTCTTTGAATGAGCTACATCCAGACTGTTTGGATCTTTGCAGAAGCCTGTTACGTCTAAACCCAGTTGAGCGATTGACATTCAAAGAGTTCTTTGGTCACAATTTCCTGAAGGAGCCCAGGTCAATTGTGAATGTTGAACGGTCTTCTGTACAACCACCAGAAAGATCAATGTTCCAGCAATGTGGTAGTATTTCAACATCTGACAAAAGGCCTCATTTGCATTCTGCTCTTCATCTGAAGAAATCAGTAGATGACCCAGTGGTAATTAGTTCAGCTGTCAATGAGACTGTGCTGTTACAAAGAAAGCATAGTGGAAATACTGCTGACACCAAGAGTGTTAAGGGCATAATTTCAAGAATTACTTGTGATAAGCAGGGACTTGGTAATGTTGCTCAATTGTCAGACCAGCCTCAAGCTTCTCATTTGATGGAGTCCATTGAGGAAGACTATGTCCTAGTTCCTCACTTTGCATCATTGGAGGTTTCCTCTGATTACTTTGAGGCATCTACGCAAGATAATATCACAAGCAGGGTTTCTATTTGTCCTTCAAAGAGGGTTGACCTTGAAGTTGGAGTTGCAAAGCAAACGAAGGATTTAGCCTTTTGCAATGTCGATAGAGAAAAAAGGTCAAAAAGTGGTAAACTTGAGACATCCTCTGTGTTTGCCGTCCCGAGGAAAGAGCAGGGTGCATCCTCAAAGCAGCCTTCAAGTAGGTTAGATTTGTTGCATCAATATGTACAGGCTCTCTCGGCACTTTCGCAAGAAAAATATGATGCAGGATTGTATCTAGAATCATTTGCAATCGAGCTGGTGGTTTTGGCTATATGGAAGAAAGCCCTTGAAATTTGTAACTCGTGGCTGGCCTCCATTGCTGAGGGCAAGTTGCCTGGAAGCACTTCAGGGAAGGAATCCACAATCTCAGACAGAGATGAAAGCATATCACAACCCATGCTAGAGAAAATAGATTTTAGTGATCCTTCAGCTGTGTCCTTGTGGGCCAAGAAAGGATTTATTTTTGCAGTTGATCATGCTGATAAACTTTCAAGCCTTATTCAAAATATGGATGGTGCAGCTGAGATGCCATATGCAATGGAGATCATATTTCAAAAGGTACTATCAATCGGCACAAGCGGTGCTGTAGATGAGTGTCTGGAAAATAGAGGCAAGGCAGCTGCATCATACTCAAAAGCGATGCTTCTACTTTCATTCGTTGTGAACCAAGCAGTGCACCTTCCACTGAACCCACCATTCTCACTAACTCCTGCTAATAAGGAGAGAATTTTACAGTATATTTCCAAGCTGCAGTCACGTCAACTTCAGTCTTCGCCATCCTTCTAA 2043 0.4332 MDFGAPNQPRLVGEYMLGPQIGSGSFAVVWRSRHRHSGLEVAVKEIEKKQLSPKVSENLLKEISILSTINHPNIIRLFEAIQTNDRIYLILEYCNGGDLATYIHRRGKVSQPIARHFMRHLGLMVLQENHLIHRDLKPQNLLLSSTGGLPLLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNQKYDAKADLWSVGAILFQLVTGRPPFDGNNQLQLFQNILTSTELQFPQESLNELHPDCLDLCRSLLRLNPVERLTFKEFFGHNFLKEPRSIVNVERSSVQPPERSMFQQCGSISTSDKRPHLHSALHLKKSVDDPVVISSAVNETVLLQRKHSGNTADTKSVKGIISRITCDKQGLGNVAQLSDQPQASHLMESIEEDYVLVPHFASLEVSSDYFEASTQDNITSRVSICPSKRVDLEVGVAKQTKDLAFCNVDREKRSKSGKLETSSVFAVPRKEQGASSKQPSSRLDLLHQYVQALSALSQEKYDAGLYLESFAIELVVLAIWKKALEICNSWLASIAEGKLPGSTSGKESTISDRDESISQPMLEKIDFSDPSAVSLWAKKGFIFAVDHADKLSSLIQNMDGAAEMPYAMEIIFQKVLSIGTSGAVDECLENRGKAAASYSKAMLLLSFVVNQAVHLPLNPPFSLTPANKERILQYISKLQSRQLQSSPSF 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2386 680 SUPERFAMILY Protein kinase-like (PK-like) 11 311 IPR011009 -
Prci12g2386 680 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Prci12g2386 680 FunFam Non-specific serine/threonine protein kinase 4 95 - -
Prci12g2386 680 CDD STKc_ATG1_ULK_like 21 270 - -
Prci12g2386 680 FunFam Maternal embryonic leucine zipper kinase 7 301 - -
Prci12g2386 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Prci12g2386 680 ProSiteProfiles Protein kinase domain profile. 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2386 680 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2386 680 SMART serkin_6 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2386 680 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 533 IPR045269 GO:0004674|GO:0006914
Prci12g2386 680 Gene3D Transferase(Phosphotransferase) domain 1 6 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2386 Prci-Chr12 41508487 41520636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2386 7 274 CBL-interacting serine-threonine protein kinases AT2G30360 37.319 4.81e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Prci12g2386 Pkinase 3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2386 - K08269 pcin:129288152 1317.75