Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2384 ATGGATTTCGGGGCCCCCAATCAGCCGCGCCTGGTCGGAGAGTACATGCTGGGACCGCAAATCGGGTCGGGTTCCTTCGCGGTGGTGTGGCGCTCAAGGCATCGTCACTCGGGTTTGGAGGTTGCAGTTAAGGAGATTGAGAAGAAACAGCTTAGCCCAAAAGTCAGTGAGAATCTGCTTAAAGAGATTTCTATTCTCAGCACCATCAATCACCCCAACATTATACGATTATTCGAAGCGATCCAGACCAATGATAGGATTTACCTTATTTTGGAGTATTGTAATGGTGGTGACCTTGCTACTTACATTCATCGACGCGGAAAAGTTTCACAACCCATTGCACGGCATTTTATGAGACACTTAGCTGCAGGCTTGATGGTACTCCAAGAAAATCACCTCATTCATAGAGATCTAAAACCTCAGAACTTACTATTGTCTAGCACTGGAGGTTTACCACTTCTAAAAATAGGCGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGGTTGGCAGACACGTTATGTGGTTCACCATTGTACATGGCTCCAGAGATAATTCAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGCGTTGGAGCCATATTGTTCCAGCTAGTGACTGGGAGGCCACCATTTGATGGAAATAATCAATTGCAGCTTTTTCAGAACATTTTAACATCCACTGAACTGCAGTTCCCACAAGAGTCTTTGAATGAGCTACATCCAGACTGTTTGGATCTTTGCAGAAGCCTGTTACGTCTAAACCCAGTTGAGCGATTGACATTCAAAGAGTTCTTTGGTCACAATTTCCTGAAGGAGCCCAGGTCAATTGTGAATGTTGAACGGTCTTCTGTACAACCACCAGAAAGATCAATGTTCCAGCAATGTGGTAGTATTTCAACATCTGACAAAAGGCCTCATTTGCATTCTGCTCTTCATCTGAAGAAATCAGTAGATGACCCAGTGGTAATTAGTTCAGCTGTCAATGAGACTGTGCTGTTACAAAGAAAGCATAGTGGAAATACTGCTGACACCAAGAGTGTTAAGGGCATAATTTCAAGAATTACTTGTGATAAGCAGGGACTTGGTAATGTTGCTCAATTGTCAGACCAGCCTCAAGCTTCTCATTTGATGGAGTCCATTGAGGAAGACTATGTCCTAGTTCCTCACTTTGCATCATTGGAGGTTTCCTCTGATTACTTTGAGGCATCTACGCAAGATAATATCACAAGCAGGGTTTCTATTTGTCCTTCAAAGAGGGTTGACCTTGAAGTTGGAGTTGCAAAGCAAACGAAGGATTTAGCCTTTTGCAATGTCGATAGAGAAAAAAGGTCAAAAAGTGGTAAACTTGAGACATCCTCTGTGTTTGCCGTCCCGAGGAAAGAGCAGGGTGCATCCTCAAAGCAGCCTTCAAGTAGGTTAGATTTGTTGCATCAATATGTACAGGCTCTCTCGGCACTTTCGCAAGAAAAATATGATGCAGGATTGTATCTAGAATCATTTGCAATCGAGCTGGTGGTTTTGGCTATATGGAAGAAAGCCCTTGAAATTTGTAACTCGTGGCTGGCCTCCATTGCTGAGGGCAAGTTGCCTGGAAGCACTTCAGGGAAGGAATCCACAATCTCAGACAGAGATGAAAGCATATCACAACCCATGCTAGAGAAAATAGATTTTAGTGATCCTTCAGCTGTGTCCTTGTGGGCCAAGAAAGGATTTATTTTTGCAGTTGATCATGCTGATAAACTTTCAAGCCTTATTCAAAATATGGATGGTGCAGCTGAGATGCCATATGCAATGGAGATCATATTTCAAAAGATGAGTGTCTGGAAAATAGAGGCAAGGCAGCTGCATCATACTCAAAAGCGATGCTTCTACTTTCATTCGTTGTGA 1896 0.432 MDFGAPNQPRLVGEYMLGPQIGSGSFAVVWRSRHRHSGLEVAVKEIEKKQLSPKVSENLLKEISILSTINHPNIIRLFEAIQTNDRIYLILEYCNGGDLATYIHRRGKVSQPIARHFMRHLAAGLMVLQENHLIHRDLKPQNLLLSSTGGLPLLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNQKYDAKADLWSVGAILFQLVTGRPPFDGNNQLQLFQNILTSTELQFPQESLNELHPDCLDLCRSLLRLNPVERLTFKEFFGHNFLKEPRSIVNVERSSVQPPERSMFQQCGSISTSDKRPHLHSALHLKKSVDDPVVISSAVNETVLLQRKHSGNTADTKSVKGIISRITCDKQGLGNVAQLSDQPQASHLMESIEEDYVLVPHFASLEVSSDYFEASTQDNITSRVSICPSKRVDLEVGVAKQTKDLAFCNVDREKRSKSGKLETSSVFAVPRKEQGASSKQPSSRLDLLHQYVQALSALSQEKYDAGLYLESFAIELVVLAIWKKALEICNSWLASIAEGKLPGSTSGKESTISDRDESISQPMLEKIDFSDPSAVSLWAKKGFIFAVDHADKLSSLIQNMDGAAEMPYAMEIIFQKMSVWKIEARQLHHTQKRCFYFHSL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2384 631 CDD STKc_ATG1_ULK_like 21 272 - -
Prci12g2384 631 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Prci12g2384 631 Pfam Protein kinase domain 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2384 631 SUPERFAMILY Protein kinase-like (PK-like) 11 313 IPR011009 -
Prci12g2384 631 FunFam Non-specific serine/threonine protein kinase 4 95 - -
Prci12g2384 631 FunFam Serine/threonine-protein kinase ATG1 7 314 - -
Prci12g2384 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Prci12g2384 631 Gene3D Transferase(Phosphotransferase) domain 1 6 351 - -
Prci12g2384 631 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2384 631 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 535 IPR045269 GO:0004674|GO:0006914
Prci12g2384 631 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2384 Prci-Chr12 41508486 41520636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2384 7 276 CBL-interacting serine-threonine protein kinases AT2G30360 37.319 4.17e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Prci12g2384 Pkinase 3.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2384 - K08269 pcin:129288152 1183.7