Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2375 ATGGCGGACCCAGCTCCTCTGCTGCAAGATATGCCTAAGGGGTTCAGATTCCTTCCCACCGATGAAGAGCTCATCCGTCATTTTCTCCACCACAAATTCATGAACGATGATCCTTCTATTCACGACACCATCCCCGAGATTGATATTTGCAAGCACGAACCCTGGGAATTACCAGAGTTTTCGCTGATCAAGTCGGACGACCCACAATGGTTTTTCTTCAGTCGTCTCGATTACAAGTACCCTAGTAGTACTCGATCTAATAGGGCAACGTCGCGGGGCTACTGGAAAGCCACCAGTAAGGAAAGGAAAATTACAGAACGAGACACTCACAATGTCATTGGGACCAAGAAGACTCTGGTTTTCCACGAAGGTCGTGTTACAGGCATTAATACTAATTGGGTTATTCATGAATATCATGATGCTCTCTTTCCTTCAGACCAGAGAACGCATGTTCTATGTAGGTTAATGAAGAAACCCAAGAATGAAACAAAAGGAAAGATGGGTGAACAAATTTATGATAGAAGGGAGCCAAGTAACCATATGGTTGTTGAGTATGAAAATCAAGCAACTGCACATATGATTCCAGAAGTGCGCAGACAAATTCTTGATCAGGTACAAAATTTCTCAAACATGGATTCAATGATTCAATCACCTTCGACGGCTGAGATGCCCTGGGAGTCGGAAGGAGAATTTGATTGCAATTCATTCTTGCTGTCATCTCCAAGAATGGATGAGCAAGAGTAA 744 0.4341 MADPAPLLQDMPKGFRFLPTDEELIRHFLHHKFMNDDPSIHDTIPEIDICKHEPWELPEFSLIKSDDPQWFFFSRLDYKYPSSTRSNRATSRGYWKATSKERKITERDTHNVIGTKKTLVFHEGRVTGINTNWVIHEYHDALFPSDQRTHVLCRLMKKPKNETKGKMGEQIYDRREPSNHMVVEYENQATAHMIPEVRRQILDQVQNFSNMDSMIQSPSTAEMPWESEGEFDCNSFLLSSPRMDEQE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2375 247 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Prci12g2375 247 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Prci12g2375 247 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Prci12g2375 247 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Prci12g2375 247 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2375 Prci-Chr12 41409573 41411187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2375 5 165 NAC Transcription Factor Family AT4G35580 51.497 4.24e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci12g2375 NAM 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2375 - - pcin:129287716 432.565