Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2374 ATGGCTGATCCAGCTCCCAAGCGGAAACGTATGCCGGTGGGATGCGGATTCCGTCCGACCGAACAAGAGCTCATCGCTCACTACCTTCACCACAGATTGAAGGCTGATGATCCATCCATTTACACTACCATCCCTGAGATTGACGTTTGCAAGTACGAGCCCCCCGATTTATTAGCTCTGGCTGCTTCCGCGATTTCGTTGACCGAGTTCGACGACTCAGAATGCTATTTCTTCGCCCCTCGCGATTATAAGTACTCTAACAGTACTCGGTCGAACAGGGCAACATCGCGCGGCTTCTGGAAAGTTACCGGCAGAGACAGAAAAATTAAGGATAGAGACACCAACAAAGTCATTGGAATCCAAAGAATTTTAGTTTTTTATGAAGGACGTTTTCCTCAAGGAATTAAAACAAGTTGGGTCATTCATGAATACCATGATGCTACATTTTCTCTCAACCAGAGAACTCATGTTGTATGCAAGCTAATGAAGAAATATGACAAGAAAACAAGAAAAAAAATCAGTACAGACTTGAAGATTCAAACTCCTTCTCAGTCAAATGAACTACAGAATTTATGA 576 0.434 MADPAPKRKRMPVGCGFRPTEQELIAHYLHHRLKADDPSIYTTIPEIDVCKYEPPDLLALAASAISLTEFDDSECYFFAPRDYKYSNSTRSNRATSRGFWKVTGRDRKIKDRDTNKVIGIQRILVFYEGRFPQGIKTSWVIHEYHDATFSLNQRTHVVCKLMKKYDKKTRKKISTDLKIQTPSQSNELQNL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2374 191 Pfam No apical meristem (NAM) protein 12 145 IPR003441 GO:0003677|GO:0006355
Prci12g2374 191 Gene3D NAC domain 20 169 IPR036093 GO:0003677|GO:0006355
Prci12g2374 191 SUPERFAMILY NAC domain 8 164 IPR036093 GO:0003677|GO:0006355
Prci12g2374 191 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 175 - -
Prci12g2374 191 ProSiteProfiles NAC domain profile. 11 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2374 Prci-Chr12 41395684 41397610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2374 11 168 NAC Transcription Factor Family AT4G35580 46.341 5.70e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci12g2374 NAM 1.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2374 - - pcin:129288806 375.941