Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2373 ATGGCGGACCCAGCTCCTCTGCTGCAAGACATGCCTAAGGGTTTCAGATTCCTTCCCACCGATGAAGAGCTCGTCCGTCACTGCCTCCACCACAAATTCATGAACGATGATCCTTCCATTCACGACACCATCCCTGAGATCGACGTTTGCAAGCACGAACCCTGGGAATTACCAGAGTTTTCGCTGATCAAGTCGGACGACCCACAATGGTTTTTCTTCAGTCATCTCGATTACAAGTACCCTGGTAGTAGTACTCGATCTAATAGGGCAACGTCGCTGGGCTACTGGAAAGCCACCGGTAAGGAAAGGAAAATTACAGAACGAGGCACTCACAATGTCATTGGGACCAAGAAGACTCTGGTTTTCTACGAAGGTCGTGTTCCTGGCATTAAAACTAATTGGGTTATTCATGAATATCATGATGCTCTCTTTCCTCCAAACCAGAGAACCCATGTTCTATGTAGGTTAATGAAGAAAATCAAGAATGAAACAAAAGGAAAGATGGATGAACTAGTTTGTGATAGAAGGGAGCCAAGTAACCATATGGTTGTTGAGTATGAAAATCAAGCAACTACGCATGTGATTCCAGATGTACGCAGACAAATTCTCGAGATACACAATTTCTCAAACATGGATTCAATGATTCAAACACCACTTGATTTTGATTCAACCGATGAGACGCCCCAGGAGCCAGAAGAAGGATTTGATTTCAGTTCATTCTTGCTGTTGTCTCCAAGATTGGATGAGCAAGAGTAA 756 0.4405 MADPAPLLQDMPKGFRFLPTDEELVRHCLHHKFMNDDPSIHDTIPEIDVCKHEPWELPEFSLIKSDDPQWFFFSHLDYKYPGSSTRSNRATSLGYWKATGKERKITERGTHNVIGTKKTLVFYEGRVPGIKTNWVIHEYHDALFPPNQRTHVLCRLMKKIKNETKGKMDELVCDRREPSNHMVVEYENQATTHVIPDVRRQILEIHNFSNMDSMIQTPLDFDSTDETPQEPEEGFDFSSFLLLSPRLDEQE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2373 251 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Prci12g2373 251 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 184 - -
Prci12g2373 251 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Prci12g2373 251 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Prci12g2373 251 MobiDBLite consensus disorder prediction 217 237 - -
Prci12g2373 251 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2373 Prci-Chr12 41390633 41392320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2373 5 172 NAC Transcription Factor Family AT4G35580 53.143 3.16e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci12g2373 NAM 2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2373 - - pcin:129287716 533.102