Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2372 ATGGCGAACGCAGTTTCTGTGCAGGAATATATGCCAGTGGGGTATAGATTCCGTCCAACAGATGAAGAACTCGTGGGTCACTACCTGAAGAACAAATTGAACGGTGATAATTCGGCTCTTCAGATTATCCGTGAGATTGACATTTGTAAGCACGAGCCCTGGGATTTACCTGAGTTTTCGATGATCAAGTCGGATGACCCAGAGTGGTTTTTCTTCAGTCCTCGTGATTTCAAGTACTCAAACAGTACTCGGTCTAACAGGGCAACATCGCGTGGCTTCTGGAAAGCCACTGGAAAAGACAGGGACATTAAGGCTCGTGGTACCGACGAGATCATTGGGACCAAGAAGACTCTTGTTTTCCATAGAGGTCGTGTTCCTAATGGCGTCAAGACCAACTGGGTCATTCATGAATATCAGGCTGTAACATTTCCTGTTGACCAGAGAACCTTTGTTCTATGCAAGTTAATGAAGAAACCTGAGAAAGCAGAAGGGAGAACCGATGCGTTAATCTGTGATGAAGGGGAGCCGAGTCGCTATATGTCTTCTGACCATGAAAATCTAGCTAGTGAGACTACAATTCCAAATGTGTACTCTTTGTCTTCAATCAATCTGGATCCATTTTTTCAGACAGAACACCCAGTGGATGAAGTTGACTTAAGCCCATTACATTTTTCTCCAATAGTCAATGAGCAGGAATTTTCTTTCCCATTTTCCCCGAGGCTCAATTCCTATACTGGAAATGATGACAGCAGTATAAACCTGCCTTTTGAAACTACCGAGGAGGAAGAAGAAAATGCTGATGAGTTTGTGAATTCAATCTTAGCTGATGAGGAAATATTCCAGAGTGAGGGAGTGGGACATGCTTTTGTCCATGAGTTCACCCCCTCAGAAGCATTGAGAAAGGTGTACTATGGAAGCAGTGACACAGATGCAGAAGTTGTCTATGCACAGTATGGAAATATTGAAACTTCAACCAAATCGTATAAAACTGATGGTCCAAGGGAATGCATGCTAATGGCAAAGGTTAACAGCTCTGAACTTTCTTCCAACCAAGCAAAACGAGGGAAAAAGGGCAGATCCTTTCAAGATGATTTGGACTCTTCCTCTGGTGATTCAACCCTTGCTAGGCCACTTGAGATCAGTCAGATAGAGCTTGTTAGCTCTGCTTCCACTATAAAGGCATGCAAAACCCAATATCAACCAAGATCAGCCAGCTCTGTGTCACTGAGATATGGAGCAAGAAGATCTCAAACACATAGAAAGTCTTCAACCAAAGCAGCATATCATGAGGCTCAGAAAGAAACACCGGAGCATTCAAACAATGATAAGGGAGTAGCTCAGGTTACTGATAAAAGAAACACTTTAAAAGCCCCAAGTAGTCAATCCTCTGGTGTCAATAGGAGGAGTTCTTTCATTCAACTAGAGACACCATTATCAAGCCAAAACCTTAGTCCACCATCCGTATATCTTGGCAATGTTGTTATAGGGCTTTTCCTGTTTGTAGTCATTATTTGGGAAATGCTATCATATGGGAAGTTCTGTTAG 1545 0.4278 MANAVSVQEYMPVGYRFRPTDEELVGHYLKNKLNGDNSALQIIREIDICKHEPWDLPEFSMIKSDDPEWFFFSPRDFKYSNSTRSNRATSRGFWKATGKDRDIKARGTDEIIGTKKTLVFHRGRVPNGVKTNWVIHEYQAVTFPVDQRTFVLCKLMKKPEKAEGRTDALICDEGEPSRYMSSDHENLASETTIPNVYSLSSINLDPFFQTEHPVDEVDLSPLHFSPIVNEQEFSFPFSPRLNSYTGNDDSSINLPFETTEEEEENADEFVNSILADEEIFQSEGVGHAFVHEFTPSEALRKVYYGSSDTDAEVVYAQYGNIETSTKSYKTDGPRECMLMAKVNSSELSSNQAKRGKKGRSFQDDLDSSSGDSTLARPLEISQIELVSSASTIKACKTQYQPRSASSVSLRYGARRSQTHRKSSTKAAYHEAQKETPEHSNNDKGVAQVTDKRNTLKAPSSQSSGVNRRSSFIQLETPLSSQNLSPPSVYLGNVVIGLFLFVVIIWEMLSYGKFC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2372 514 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 253 - -
Prci12g2372 514 MobiDBLite consensus disorder prediction 406 446 - -
Prci12g2372 514 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Prci12g2372 514 MobiDBLite consensus disorder prediction 345 373 - -
Prci12g2372 514 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Prci12g2372 514 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Prci12g2372 514 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Prci12g2372 514 MobiDBLite consensus disorder prediction 423 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2372 Prci-Chr12 41382875 41386614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2372 4 173 NAC Transcription Factor Family AT4G35580 56.571 4.94e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci12g2372 NAM 6.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2372 - - pcin:129287580 1006.13