Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2365 ATGTTGGAGGATGGAAGGCTGGTAGTGCTGTCCATCAGCATCTGTTTTCTGGGTTTAATCCCCCTTGCCATCAATGGCGACACGGATCCAAATGATGCTGCTGCTCTAAGGGTTATGTTTAGCAGCATGAATTCACCATCCCAGCTAGGATGGCCTGCAAATGGTGACGATCCGTGTGGACAGCAATGGAAGGGCATTAGTTGCTCAGGCAACCGAGTCACAGAGATTAAGTTGCCTGGCCTTGGTCTGAATGGAATGCTGGGCTACCAGTTACAAACCTTGACATCTTTGATCAACCTGGACATGAGTAACAATAATCTTGGAGGCACTATACCATATCAACTTCCTCCAAATGCACAGCGATTAAACCTTGCTAACAACAACTTCACTGGGGAAGTAGTTTATTCCATTTCTAATATGACCTCTCTTGAATACCTGAATCTTGGTCACAATCAACTCCAGGGTGGACTGAGTGTCAACTTTGAAAAGCTTTCTTCACTCTCCACATTGGATCTCTCTTTCAATTCTCTGTCAGGTGACCTTCCTCAGAGTCTCACCTCACTTTCAAGCATCACCACCATGTATTTGCAAAGCAACCAGTTTACAGGCACTATTGATGTCCTTGCCAGTCTTCCTCTTGAAAATCTGAATGTGCAAAACAATCATTTCACAGGTTGGATACCAGAACAGTTGAAAAACATAAACCTACAGAAGGATGGTAATGCATGGAGCTCAGGTCCTGCACCCCCGCCCCCACCTGGGACACCTCCTGCAACTAGAAGCACCCGAACTCACAAAACTGGTGGTGGCAGTGGAAGAAACACCCCGTCAGATGCTGATACCAGTGACAATGATAAAAAATCTGGTATAGGAGTTGGTGGCATTGCAGGAATAGTGATCTCCATATTAGTGGTTGGAGCAATAGTAGCATTCTTTCTGATGAAGAGGAGATCCAGGAAGCCATCTCCAGATATGGAAAATGTTGACAATCAGCCCTTTGCTCCTCTTGCATCAAGTGAAGTGCATGAAATGAAGTCCATGCAAACATCCTCTGTGCCTGACACAAAGACTTTTGTTCCTTCGGCCTCATTCAATCTCAAACCTCCACCTATTGATCGTCACAAATCATTTGATGAAGATGAATTTTCAAAGAAGCCTGATATTGTAAAGAAAACTGTAACAGCTCCTGCAAATGTAACATTATATTCTATAGCAGATCTACAGATTGCTACTGGCAGCTTCAGTGTGGATAACCTTCTTGGTGAGGGATCTTTTGGACGTGTTTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCCGTGAAGAAGATAGATTCATCTGTCCTTCCTAATGATATGTCTGAAGATTTTATTGAAGTTGTTTCAAACATCTCCCAGTTGCACCATCCCAATGTAACAGAGCTCATTGGTTATTGTTCAGAGCATGGACAACATCTTCTGCTCTACGAGTTTCACAAGAGTGGATCACTGCATGACTTCCTTCACTTGCCAGACGAACATAGCAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGAACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAAAATATCAAATCAACCAACATATTGCTCGATACAGAGCTTAATCCTCATCTCTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCCGGCCAGGTATTAAACCATAATGCTGGATCGGGATATGAGGCACCTGAAGTCGGCTTGTCTGGTCAGTATACTCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTTGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGTCTCTAGTTCGATGGGCAACACCACAACTTCATGATATTGATGCATTGACTAAAATGGTTGACCCTGCACTGGAAGGTCTATACCCTGTCAAGTCTCTTTCTCGGTTCGCTGATGTTATCGCTCTTTGCGTCCAGCCGGAGCCTGAATTCCGACCACCGATGTCAGAAGTGGTTCAAGCATTGGTCCGATTGGTGCAACGTGCAAACATGAGCAGGCGAACAACATTTGGATCATCAGACCTAGGAGGATCCCAACGAGGAGATAACCCGGAAGCACAGGAAATGTAA 2163 0.4452 MLEDGRLVVLSISICFLGLIPLAINGDTDPNDAAALRVMFSSMNSPSQLGWPANGDDPCGQQWKGISCSGNRVTEIKLPGLGLNGMLGYQLQTLTSLINLDMSNNNLGGTIPYQLPPNAQRLNLANNNFTGEVVYSISNMTSLEYLNLGHNQLQGGLSVNFEKLSSLSTLDLSFNSLSGDLPQSLTSLSSITTMYLQSNQFTGTIDVLASLPLENLNVQNNHFTGWIPEQLKNINLQKDGNAWSSGPAPPPPPGTPPATRSTRTHKTGGGSGRNTPSDADTSDNDKKSGIGVGGIAGIVISILVVGAIVAFFLMKRRSRKPSPDMENVDNQPFAPLASSEVHEMKSMQTSSVPDTKTFVPSASFNLKPPPIDRHKSFDEDEFSKKPDIVKKTVTAPANVTLYSIADLQIATGSFSVDNLLGEGSFGRVYRAQFDDGEVLAVKKIDSSVLPNDMSEDFIEVVSNISQLHHPNVTELIGYCSEHGQHLLLYEFHKSGSLHDFLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSTNILLDTELNPHLSDSGLASYIPNAGQVLNHNAGSGYEAPEVGLSGQYTLKSDVYSFGVVMLELLCGRKPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSSDLGGSQRGDNPEAQEM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2365 720 PRINTS Leucine-rich repeat signature 164 177 - -
Prci12g2365 720 PRINTS Leucine-rich repeat signature 97 110 - -
Prci12g2365 720 SUPERFAMILY Protein kinase-like (PK-like) 396 686 IPR011009 -
Prci12g2365 720 MobiDBLite consensus disorder prediction 238 290 - -
Prci12g2365 720 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2365 720 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Prci12g2365 720 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Prci12g2365 720 MobiDBLite consensus disorder prediction 698 720 - -
Prci12g2365 720 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Prci12g2365 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Prci12g2365 720 SUPERFAMILY L domain-like 28 233 - -
Prci12g2365 720 Gene3D Ribonuclease Inhibitor 181 245 IPR032675 -
Prci12g2365 720 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Prci12g2365 720 Gene3D Transferase(Phosphotransferase) domain 1 493 705 - -
Prci12g2365 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Prci12g2365 720 MobiDBLite consensus disorder prediction 259 278 - -
Prci12g2365 720 PANTHER LEUCINE RICH REPEAT KINASE 2 71 692 - -
Prci12g2365 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 491 - -
Prci12g2365 720 Pfam Protein tyrosine and serine/threonine kinase 416 686 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2365 Prci-Chr12 41298009 41305649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2365 1 699 Strubbelig Receptor Gene Family AT1G53730 67.327 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Prci12g2365 PK_Tyr_Ser-Thr 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2365 - - gmx:100807707 1077