Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2357 ATGGGTGGTTTGGCAGGAACAGATGACAATTCGGGGGACTCTCCGGGGATGGAATTAACTGGAAAGATCATGGTTGTAGCTATAATATTCCTCTTTTTCGTGATTGTGATCGTCTGCTTCCTCCATCTCTACGCCAAATGGTTCTGGCGGAGCGTTGAAGGAAGCTCCTCTACCACCGATCGCCACAGTGGCCACCGCCGCCGCCGCCGATTTGTCTTCGCACCTGGACAAGACCCGGCAATCCATGGCGTCCAGAGAAGAGGACTTGAGCCTGAAGTCCTCAGATCCATACCTGTATTGGTATACCAACCAGAGGAATTCAAAGAAGGTTTGGAATGTGCGGTTTGTCTCAGCGAGCTTGTTCATGGAGAAAAAGCAAGGATATTACCCAAATGCAATCATGGGTTTCACGTGGAATGCATTGATATGTGGTTCCGATCCCATTCTACCTGTCCACTTTGCCGGAACCCAGTCGCTTCTGAATCCATTGAATCAAATTATAGTTCAGGTGTTCGAGAAAATGTCTCAGACAATTATAGTCATTCATCAGACTCAGAAAGTTCGGATGCTATGAGCGAGGCAGATTTAGAGTCTCAAAATTTCCCCACAAATGTGTTGATTTGGGGAAACCAGACCCAAGTGAATTCTATTGGTGCAGGTCCTTCTCTTCAGACACCTTCTTCCTCATCATCGTTAGCAGCAGCAGAAGCAGATAGCAGCAGCAACAATAACAATAGACGTAATGGAATATTGGTGATTGACATACCAAGGGAGATGAATCCATCATCTTTACCTTCTACTAGCATGTGTGCTGAAGATGAGTTGAAGTCACCAATGACATCTCGACTCAAGTCATTCAAGAGGATGTTAAGCATGAAGTTCAGTCCTCGTAGTCCTAGTTCTGTAGATGTGGAACAAGGAGGGAGAGGACAGACCTAG 939 0.4622 MGGLAGTDDNSGDSPGMELTGKIMVVAIIFLFFVIVIVCFLHLYAKWFWRSVEGSSSTTDRHSGHRRRRRFVFAPGQDPAIHGVQRRGLEPEVLRSIPVLVYQPEEFKEGLECAVCLSELVHGEKARILPKCNHGFHVECIDMWFRSHSTCPLCRNPVASESIESNYSSGVRENVSDNYSHSSDSESSDAMSEADLESQNFPTNVLIWGNQTQVNSIGAGPSLQTPSSSSSLAAAEADSSSNNNNRRNGILVIDIPREMNPSSLPSTSMCAEDELKSPMTSRLKSFKRMLSMKFSPRSPSSVDVEQGGRGQT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2357 312 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 161 IPR044675 -
Prci12g2357 312 CDD RING-H2_EL5-like 112 155 - -
Prci12g2357 312 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Prci12g2357 312 SMART ring_2 113 154 IPR001841 -
Prci12g2357 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 160 IPR013083 -
Prci12g2357 312 MobiDBLite consensus disorder prediction 291 312 - -
Prci12g2357 312 SUPERFAMILY RING/U-box 93 159 - -
Prci12g2357 312 MobiDBLite consensus disorder prediction 294 312 - -
Prci12g2357 312 FunFam RING-H2 finger protein ATL3 81 160 - -
Prci12g2357 312 MobiDBLite consensus disorder prediction 217 247 - -
Prci12g2357 312 MobiDBLite consensus disorder prediction 165 196 - -
Prci12g2357 312 Pfam Ring finger domain 112 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2357 Prci-Chr12 41241368 41243009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2357 16 291 C3H Transcription Factor Family AT1G53820 42.321 2.66e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2357 - - cave:132187344 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2357 12 41241368 41243009 Prci12g2357 12 41241368 41243009 ECH