Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2347 ATGAGCAAGTTACGGCACGTCTTCGCCGGAATCTCAGATTCCGGCGACCACAGCAGAAACAAGAAGCTCTTTCTTGCTCTGTTCTCCACTCTGCTCCTTCTCGTCGCCGCTGTCGCCATCATCGCCGGTGTCAATTCCCGCCAAAAATCTTCCGGTGACGATAGTTTGAATTTCTCCACCCATCCATCCCACGCCATAGTCAAATCCGCTTGCAGCTCCACACTTTACCCTGAACTCTGCTTCTCTGCTATCTCCTCCGAGCCTGGATTCACCGAGAAAGTCTCTTCCCACCGCGATGTCATCGAGCTGTCCATAAACATAACAGCCAGAGCTGTCGAACACAATTTCTTCACCGTCGAGAAGATAATGGCAACCAGAAAGGGAAGCCTCACGGAGAGAGAGAAAACCGCCCTTCATGACTGTTTAGAGACGATTGACGAAACGCTTGACGAGCTTCACACTGCTAGGGAAGATCTGAAAGTCTATCCGAACAAGAAGACTCTGTACCAGCACGCCGACGATCTGAAGACTCTGATAAGCGCCGCCATTACCAACCAAGTCACGTGCCTCGACGGATTCTCTCACGACGGCGCTGATAAGAAAATCAGGAAAGCACTGGAGGCAGGGCAGGTGCACGTGGAGCACATGTGCAGCAATGCTCTGGCGATGATTAAGAACATGACGGACACGGATGTGGCGAACTACGAGAAGAAGATGGGGATCACAAAGAGCAGGAGGCTGATGGAGGCGACGGAGGGCGCTGTTCAGTGGCCAGAGTGGATGTCGGCGGCAGACAGGCATCTATTGCAGTCGACGGAAGTGAAGCCGGACGTGGTGGTAGCGGCAGACGGGAGCGGAGATTTTAAGACGGTGGAAGCAGCAGTGACGGCGGCGCCGGAGAAGAGCGCGAAGAGATATGTGATAAAGATAAAAGCAGGAGTTTACAGAGAGAATGTGGAAGTTCCGAAGAAGAAGACAAATATAATGTTCTTGGGGGATGGAAGATCTAACACTATCATCACAGGAAGCAGGAATGTCGTCGACGGAAGCACAACCTTCCATTCCGCCACTGTCGCCGTAGTGGGAGAAAGATTCCTCGCTCGCGACATAACCTTCGAGAACACGGCCGGCCACGCGAAGCACCAGGCCGTCGCCCTCCGGGTAGGAGCCGACTTCGCCGCCTTCTACCAGTGCGACTTCCTCGCCCATCAGGATACCCTCTACGTCCACCACAACCGCCAGTTCTTCATCAACTGCCTCATTGCCGGTACCGTCGACTTCATCTTCGGCAACTCCGCCGTCGTCTTCCAAGACTGCGATATCCACGCTCGCCTCCCCGGCTCCGGCCAGAAGAACATGGTCACAGCCCAGGGCAGGGTGGACCCGAACCAGAACACCGGCATCGTGATCCAGAAGTCCCGTATCGGAGCAACGAAGGACCTGGAGGCGCAGAAGAAGAACTTCAAGACTTTCCTGGGGCGGCCGTGGAAGGAGTATTCGAGGACGGTGATAATGCAGTCGAGCATAACCGACGTGATCGATCCGGTGGGGTGGCATGAGTGGAATGGGGATTTTGCTTTGGACACTCTGTTCTACGGAGAGTATCAGAACAGTGGCGCCGGTGCCGGGACGGCGAACAGAGTGAAGTGGAAGGGGTTTAAGGTTATAACGAGTGCTTCGGAGGCTCAGAAGTTTACTGCTGCCAACTTCATTGGCGGGTCTAACTGGCTGGGGTCCACCGGCTTTCCTTTCTCTCTCGGTCTTTAG 1767 0.5461 MSKLRHVFAGISDSGDHSRNKKLFLALFSTLLLLVAAVAIIAGVNSRQKSSGDDSLNFSTHPSHAIVKSACSSTLYPELCFSAISSEPGFTEKVSSHRDVIELSINITARAVEHNFFTVEKIMATRKGSLTEREKTALHDCLETIDETLDELHTAREDLKVYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHDGADKKIRKALEAGQVHVEHMCSNALAMIKNMTDTDVANYEKKMGITKSRRLMEATEGAVQWPEWMSAADRHLLQSTEVKPDVVVAADGSGDFKTVEAAVTAAPEKSAKRYVIKIKAGVYRENVEVPKKKTNIMFLGDGRSNTIITGSRNVVDGSTTFHSATVAVVGERFLARDITFENTAGHAKHQAVALRVGADFAAFYQCDFLAHQDTLYVHHNRQFFINCLIAGTVDFIFGNSAVVFQDCDIHARLPGSGQKNMVTAQGRVDPNQNTGIVIQKSRIGATKDLEAQKKNFKTFLGRPWKEYSRTVIMQSSITDVIDPVGWHEWNGDFALDTLFYGEYQNSGAGAGTANRVKWKGFKVITSASEAQKFTAANFIGGSNWLGSTGFPFSLGL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2347 588 SMART PMEI_2 62 223 IPR006501 GO:0004857
Prci12g2347 588 PANTHER PECTINESTERASE 33 578 - -
Prci12g2347 588 Pfam Pectinesterase 277 573 IPR000070 GO:0030599|GO:0042545
Prci12g2347 588 CDD PMEI-like_3 69 228 - -
Prci12g2347 588 Pfam Plant invertase/pectin methylesterase inhibitor 66 223 IPR006501 GO:0004857
Prci12g2347 588 FunFam Pectinesterase 63 228 - -
Prci12g2347 588 NCBIfam pectinesterase inhibitor domain 57 227 IPR006501 GO:0004857
Prci12g2347 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 228 IPR035513 -
Prci12g2347 588 FunFam Pectinesterase 271 588 - -
Prci12g2347 588 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Prci12g2347 588 SUPERFAMILY Pectin lyase-like 274 587 IPR011050 -
Prci12g2347 588 Gene3D - 271 588 IPR012334 -
Prci12g2347 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 228 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2347 Prci-Chr12 41164894 41170437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2347 63 588 Carbohydrate Esterase AT3G14310 72.828 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2347 K01051 - gmx:100776623 866.685