Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2311 ATGGAAGCTGACGACAAGATCCAGTCGCCTCATTCGCCGGCCAGTGAATCTCCTGGTTCGCCGCAATCCAACGGTCGGATCACGGTCACGGTGGCTGCACCGGCGCCGTCGCCGCCCCAAAACAGTTTGGCACTGGCGCTTCCTGTTCAGCACCAGCAGCCGAAGGGTAATGGTGGTGGTGGTGGAGGGAGGGAGGATTGCTGGAGTGAAGGAGCGACGGCGGTGTTGATCGACGCGTGGGGCGACAGATACTTGGAACTGAGCAGAGGGAATCTGAAGCAGAAGCACTGGAAGGAGGTTGCAGATATCGTGAGTAGCAGGGAGGACTACCGGAAAACCCCCAAGACTGATATTCAGTGCAAGAATCGGATCGACACGGTGAAGAAGAAGTACAAGTTGGAGAAGTCCAAGATCGCAGCCGGTGGGGGCAGTAAATGGCCGTTCTACGAGAGATTGGACCAGTTGATCGGTCCGACTGCGAAAATTTCTGGTTCTGCCGGTGGCAGTGCTGCCGGAGCTAATACGGCGAACAGTCTGTCAACTCAGAAAGTTCCACTGGGAATTCCGGTAGGAATTCGTGCTGTGAGTCAGAATCCATATCAGGCTCATCAACGACTGCAGAAGCACCAGCTTCGGATGAAGACACCAAGCCAGAAGATACAGTTACGGAAGCGTGCTCCAGTTAACTCAGATTCGTCGCCGTCTGAGAGAGAATCGTCACCGGTTTCAAGTGATAGTTTTCCACCGGGCACATATGAGACGAAGAGACCTAGAATGCCAAGAGTTATCAATTCTGATGCTGTACCTGTGGAAACGAAAAATAAAGGTTGGGGAAGTGCTATTAGGGAATTGACGCAGGCGATACTGAAATTCGGGGAAGCTTATGAAAAAGCAGAGAGCTCGAAGATTCAACAGGTTGTGGAAATGGAGAAGCAGAGGATGAAATTTGCCAAGGAGATGGAATTGCAGAGAATGCAGTTTTTCATGAAGACCCAGCTGGAGTTATCGCAGCTGAAGCGCGGGAAGAGAGGAGGAGGAAACGCTAGCAACATCAACAGTAACATTAACAATCATAGTGACAGTGATAACCTGGTTAGATTGGATTAG 1107 0.5131 MEADDKIQSPHSPASESPGSPQSNGRITVTVAAPAPSPPQNSLALALPVQHQQPKGNGGGGGGREDCWSEGATAVLIDAWGDRYLELSRGNLKQKHWKEVADIVSSREDYRKTPKTDIQCKNRIDTVKKKYKLEKSKIAAGGGSKWPFYERLDQLIGPTAKISGSAGGSAAGANTANSLSTQKVPLGIPVGIRAVSQNPYQAHQRLQKHQLRMKTPSQKIQLRKRAPVNSDSSPSERESSPVSSDSFPPGTYETKRPRMPRVINSDAVPVETKNKGWGSAIRELTQAILKFGEAYEKAESSKIQQVVEMEKQRMKFAKEMELQRMQFFMKTQLELSQLKRGKRGGGNASNINSNINNHSDSDNLVRLD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2311 368 MobiDBLite consensus disorder prediction 10 48 - -
Prci12g2311 368 MobiDBLite consensus disorder prediction 1 66 - -
Prci12g2311 368 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 35 342 IPR044823 -
Prci12g2311 368 MobiDBLite consensus disorder prediction 213 250 - -
Prci12g2311 368 Gene3D - 68 133 - -
Prci12g2311 368 MobiDBLite consensus disorder prediction 199 263 - -
Prci12g2311 368 Pfam Myb/SANT-like DNA-binding domain 65 155 IPR044822 -
Prci12g2311 368 MobiDBLite consensus disorder prediction 346 362 - -
Prci12g2311 368 FunFam trihelix transcription factor ASIL2 68 133 - -
Prci12g2311 368 MobiDBLite consensus disorder prediction 339 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2311 Prci-Chr12 40908001 40909773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2311 1 359 Trihelix Transcription Factor Family AT3G14180 45.909 3.52e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci12g2311 Myb_DNA-bind_4 2.7e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2311 - - qsa:O6P43_027506 458.759