Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2289 ATGTCTACTTTTTCTGATACGGCGGCTCATGGCCGGAGGGTAGGCAAGCCGGCGGAGAGGTACAGTTTCTCCCAGACTTGCAATCTCATAAGCCAGTTCTTGAAGGGCAAGCGTAGTTCTGGTGCTCTGAACCTTGGAATGTGCGGGAAAAATGATCCCAGAGGAACTCCAAGTACTACGATGGATTTGTTAACGTCCCTGGAGAAATCTGATGATTCCTCGAGACAAAGTCCTTCAGCTATGGATTTTCTTCCTCAGATTGTAGAAAACCATTCTGTTATTAGGTCGCAGGCCAAGGCAGAGTCTAAAACTCCCCAAATGGCAATATTTTACGCCGGGAAGGTGTTAGTGTTTGACGATTTTCTGCCGGAGAAGGCGACGGAGATCATGGAACTAGCCACCAAGTTAAGCTCTGATAATTCTGCGGCTCTTGAAAATATCAACGAGGTTAAGGTGCCTCAAACAGGCACATCCCAAGAAGCTTCTCGTCCAGGCTCTCTTGCTTCTGGTTCAGACATAAGATACCCGAGGAGGGCCTCGCTTTTAAAATTTCTGGAGAAAAGAAAAGAAAGGGTCATTGCAAGAGGACCTTATCATATGAACCCGAAGCATGAAGGAGGCAGATCTGGAGGCAACCCTGAAGATCAACCTTGCAAGCCCTTTGACCTTAACTTATAG 678 0.4705 MSTFSDTAAHGRRVGKPAERYSFSQTCNLISQFLKGKRSSGALNLGMCGKNDPRGTPSTTMDLLTSLEKSDDSSRQSPSAMDFLPQIVENHSVIRSQAKAESKTPQMAIFYAGKVLVFDDFLPEKATEIMELATKLSSDNSAALENINEVKVPQTGTSQEASRPGSLASGSDIRYPRRASLLKFLEKRKERVIARGPYHMNPKHEGGRSGGNPEDQPCKPFDLNL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2289 225 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 202 IPR040390 -
Prci12g2289 225 MobiDBLite consensus disorder prediction 149 166 - -
Prci12g2289 225 MobiDBLite consensus disorder prediction 149 172 - -
Prci12g2289 225 Pfam Jas motif 177 198 IPR018467 -
Prci12g2289 225 Pfam tify domain 102 133 IPR010399 -
Prci12g2289 225 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
Prci12g2289 225 MobiDBLite consensus disorder prediction 193 225 - -
Prci12g2289 225 SMART tify_2 100 135 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2289 Prci-Chr12 40688735 40690386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2289 22 214 Tify Gene Family AT1G19180 36.000 1.36e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci12g2289 tify 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2289 K13464 - gmx:100778559 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2289 12 40688735 40690386 Prci12g2289 12 40688735 40690386 ECH