Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2288 ATGGCCATAGCTCCGGCAATCCTCCGGCCAACTCTCCTCTTATTCTCCACCTTCTTCGTTGTCTTTCGTTTGGTAAATTCAATGTCAGAAGTTCAAGCTTTGGTTAATTTTAAAGCATCATTGTCCGATCCTCAAGCTCTGAAAAGTTGGGTGGTTAACTCTGTACCTTGCAAAGAAGGGGAAGAATGGGATGGGGTTATCTGCAGCGATGGATTCATCTCTGGCATTCGCTTAGAAGGAATGGGGTTGTCAGGGAAGATCGATGTAAATCCATTGCTGGAACTTAAAGGTCTTCGAACTTTCAGCATTATGAACAATTCTTTTTCAGGTGCAATTCCGGAAATCAATCGAATAGGTTTCTTGAGAGCTTTGTACTTGTCGGGAAATCAATTTTCTGGCGAGATTCCGTCAGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTTAACGATAATAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCTACTCCTCGAGCTACACCTCGAGAACAATCAGTTTAGCGGTAACCTCCCGAATCTGAGTAAAACATTGTTGATAGAATTCGATGTGTCCAACAACAAACTGGAAGGCGAAATCCCGTCGAGCTTAACACAATTTAGTGCGAGCTCATTTTCTGGGAATCCTGGCCTCTGCGGCGAGAAATTAAACAAAGCGTGTCAAAATTCAGTTGAGCCGCCAAAATCCGTGGAAAATACGGAACAAAATGAAGACAGCGATGCCGATGACTCTGATTCAAATTCTGGAAGTAAGAGTAGTAACAAAGTGATGATTGCCGCTGGTGTTGTTGCATCAATTGTAGTGTTTCTAATACTTCTAGCTCTACTTTTCGTTCGATCAAGGCGAAAGAAGAAGGAGAAGGGAATACAGGGCTCGGTTAGATCAGGGAACAACAACGAAGAATCATCAGCATCAGTAGAAGTTCAGGTTGCTGCACCAGAGAAGAAGGAAGAGACAAGTATATCCAGAAAATCAAGTCGGAATGGTTCCAGCAGAAGGGGGACCGGCAAGGGTGGCGGCAACTGCGGCGTCGGAGAGCTTGTGATGGTGAATAGTGAAACTTGTGTGTTTGGGATGCTGGATTTGATGAAGGCAGCAGCAGAAGTTTTGGGGAGTGGAGGGTTTGGGTCATCCTATAAAGCAGTGATGGCTGATGGGGTTGCAGTGGTGGTGAAGAGGATGAGGGAGATGAATGTGTTGACGAAAGATGGGTTTGATGCAGAGATGAAGAAGCTTGGGAGTTTAAGACATAGGAATATCTTGACTCCTTTGGCTTATCATTACAGGAAGGATGAGAAATTGCTGGTTTCTGAGTATGTTCCTAAAGGGAGTCTGCAATATTTGTTGCACGGTGATCGTGGACCATCCCACGCTGAACTGGACTGGCCTACTAGTTTTAAGATTGTGCGAGGGATTGTTGATGGGATGCTTTATCTTAATACACAACTTGCTTCCTCTGTTTTACCCCATGGCAATCTCAAGTCCAGTAATATTCTCCTTGGTCCTGATTACGAGCCGATGCTGGTTGATTTTGGGTTATGCTCCTTGATCAACCCTACCAATCTAAGCCAAGCCCTATTTGCTTACAAGACTCCTGAAGCCTTACAGAAAGGCCAAGTTTCTCCCAAATCTGACGTTTATTGTCTGGGAGTTGTCATTCTTGAGATCCTCTCTGGGAAATTTCCTTCCCAATATCTCAACAATGGCAACGGCGGAATTGATGTAGTTCAGTGGGCTAACTCAGCCATATCTGACGGAAGGGTATTAGAGATGCTTGATCCTCAACTTGCTAGCTCTAAAAGCTCTATTGGTCAGATGGAGAGACTCCTCAATATTGGTGTTGCTTGTACTGCAAGTAACCCCGAGCAGCGACCACACATGACAGAAGCATTGAGAAGGATAGAGGAAATACAAACGAAAGGTGCCCAGGAATCAGGCTCAAAAGGTCAAGATGATTGGTCCCAGAGAAGTTTTGGATCAAGCAGCGTTGGAAGCCAATCGGGCCACCGGCACACTGATAGTCTTGATTTTGCCATTTCCTAA 2073 0.4481 MAIAPAILRPTLLLFSTFFVVFRLVNSMSEVQALVNFKASLSDPQALKSWVVNSVPCKEGEEWDGVICSDGFISGIRLEGMGLSGKIDVNPLLELKGLRTFSIMNNSFSGAIPEINRIGFLRALYLSGNQFSGEIPSDFFQKMRSLKKLWLNDNNFTGQIPSQIPLLLELHLENNQFSGNLPNLSKTLLIEFDVSNNKLEGEIPSSLTQFSASSFSGNPGLCGEKLNKACQNSVEPPKSVENTEQNEDSDADDSDSNSGSKSSNKVMIAAGVVASIVVFLILLALLFVRSRRKKKEKGIQGSVRSGNNNEESSASVEVQVAAPEKKEETSISRKSSRNGSSRRGTGKGGGNCGVGELVMVNSETCVFGMLDLMKAAAEVLGSGGFGSSYKAVMADGVAVVVKRMREMNVLTKDGFDAEMKKLGSLRHRNILTPLAYHYRKDEKLLVSEYVPKGSLQYLLHGDRGPSHAELDWPTSFKIVRGIVDGMLYLNTQLASSVLPHGNLKSSNILLGPDYEPMLVDFGLCSLINPTNLSQALFAYKTPEALQKGQVSPKSDVYCLGVVILEILSGKFPSQYLNNGNGGIDVVQWANSAISDGRVLEMLDPQLASSKSSIGQMERLLNIGVACTASNPEQRPHMTEALRRIEEIQTKGAQESGSKGQDDWSQRSFGSSSVGSQSGHRHTDSLDFAIS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2288 690 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Prci12g2288 690 MobiDBLite consensus disorder prediction 301 316 - -
Prci12g2288 690 ProSiteProfiles Protein kinase domain profile. 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2288 690 SUPERFAMILY Protein kinase-like (PK-like) 378 644 IPR011009 -
Prci12g2288 690 SUPERFAMILY L domain-like 28 223 - -
Prci12g2288 690 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Prci12g2288 690 CDD TM_EGFR-like 267 297 - -
Prci12g2288 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 652 IPR046959 -
Prci12g2288 690 MobiDBLite consensus disorder prediction 647 690 - -
Prci12g2288 690 MobiDBLite consensus disorder prediction 650 683 - -
Prci12g2288 690 Gene3D Ribonuclease Inhibitor 186 230 IPR032675 -
Prci12g2288 690 Gene3D Transferase(Phosphotransferase) domain 1 450 669 - -
Prci12g2288 690 Pfam Protein kinase domain 378 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2288 690 MobiDBLite consensus disorder prediction 297 348 - -
Prci12g2288 690 MobiDBLite consensus disorder prediction 232 263 - -
Prci12g2288 690 Gene3D Phosphorylase Kinase; domain 1 358 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2288 Prci-Chr12 40663767 40666377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2288 11 647 Receptor kinase-like Gene Family AT3G42880 44.901 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci12g2288 Pkinase 5.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2288 - - qsa:O6P43_018426 734.947