Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2272 ATGAAGTTGACTTCATCATCATGGCTAGCAATCTTTATCCCCTTCCTCACCTTCCTCCTCTTCTTTCGCCGTTTTCGCCGCCACCGATATAACCTACCACCGGGGCCAAAACCATGGCCTATCATAGGAAACCTCAACCTCATAGGCCCTATTCCTCACCACTCCTTCTATGAGCTCACCCAAAAATATGGACCCATCATGCATCTCAAGTTAGGCTTCAAAGACATCATCATCGTGTCCTCTGCTAACATGGCTAAAGCCTTCCTTAAAACCCACAATCATAACTTCTCGTCACGACCAAAAACTACCGCCGGAGAGCACGTGGCCTACAATTACTCCGATATTCTCTGGGCCCCCTATGGCCCTTACTGGCGCCAAGCCCGCAAGATATGCTTTACAAAAATGTTCTCTCAAAAAAGCCTACAATCGAGCGGGTATATCAGAAAGGAAGAGATGAAAAGTATGTTGAATGAACTTTTCATTTCTTCAGGCACCACCGTATTATTGAGAGATTACTTTTACACTTTAACCCTAAATATTATAAGTCGCATGGTGTTGGGAAAGAAGTACGTGGAGAAAGGTCAAGGTGGCTTTGTTAGCTGGGAAGAGTTCAGAGAATTGTTGGACGAGTTTGTGCTGCTCAATACGGGAGTTGCAAATATTGGGGATCTGTTCCCTTGGATTAATTCCTTGGACTTGCAAGGTTACATGAAGAGAATGAAGGATTTCAATGCTAAGTTTGATAGGTTTCTGGAGTATGTGTTAGATGACCATGAAGAGAAAAGAAAAGGGGTTGAGGATTATGCGGCCACAAACATGGTGAATGTGCTTTTACAGCTCGTTGATGATCCCACTCTTGAGATTAAGCTTCAAAGGCACAATGTCAAAGCATTAACTCAGGACCTTGTAATAGCTGCCATAGATACCACAGCAATAACTATTGAATGGGCAATGTCTGAGCTGTTGAAAAACCCAAAAATCTTAAGGAAGTCTACAGAAGAGTTGGACAAAGTGATCGGAAGAGATAGGTGGGTGGAAGAGACGGACTTAGTCAACTTGCCTTATATTGAAGCCATTGTTAAAGAAACATTGAGATTGCACCCTGTAGCCTCTGTGTTGCCTCCAAAAATAGCCATGAATGGTGACATTGAAATTGCAGGGTATGACATCCCAAAAGGAACTCAAGTGATTGTCAATGTGTGGGCTATTGGTAGAGACCCTATGATGTGGGACAACCCTAATGAGTTTTACCCAGAAAGGTTCATAGGTAAAGATATTGATGTGACAGGACATCACTTTGGGTTATTGCCATTTGGGGCTGGAAGGAGGATCTGCCCTGGTTATCCTCTTGCTCTAAGGGTTGTGAATTCAAGTATAGGAAATTTGGTGCATGGGTTTTCTTGGAGCTTGCCGGATCACATGAAGGAAGTAGACTTAAACATGGAGGAAATTTGCAGGCTTACTACCCTCAGAAAACAACCCCTTGAAGCTGTTGTTAAGCCTAGGCTTTCATCTCATGATCTTTACTGA 1530 0.4327 MKLTSSSWLAIFIPFLTFLLFFRRFRRHRYNLPPGPKPWPIIGNLNLIGPIPHHSFYELTQKYGPIMHLKLGFKDIIIVSSANMAKAFLKTHNHNFSSRPKTTAGEHVAYNYSDILWAPYGPYWRQARKICFTKMFSQKSLQSSGYIRKEEMKSMLNELFISSGTTVLLRDYFYTLTLNIISRMVLGKKYVEKGQGGFVSWEEFRELLDEFVLLNTGVANIGDLFPWINSLDLQGYMKRMKDFNAKFDRFLEYVLDDHEEKRKGVEDYAATNMVNVLLQLVDDPTLEIKLQRHNVKALTQDLVIAAIDTTAITIEWAMSELLKNPKILRKSTEELDKVIGRDRWVEETDLVNLPYIEAIVKETLRLHPVASVLPPKIAMNGDIEIAGYDIPKGTQVIVNVWAIGRDPMMWDNPNEFYPERFIGKDIDVTGHHFGLLPFGAGRRICPGYPLALRVVNSSIGNLVHGFSWSLPDHMKEVDLNMEEICRLTTLRKQPLEAVVKPRLSSHDLY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2272 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Prci12g2272 509 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 Gene3D Cytochrome P450 2 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 Pfam Cytochrome P450 33 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PANTHER CYTOCHROME P450 98A9 7 509 - -
Prci12g2272 509 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci12g2272 509 FunFam Cytochrome P-450 19 22 500 - -
Prci12g2272 509 CDD CYP71_clan 64 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2272 Prci-Chr12 40442746 40444831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2272 5 504 Cytochrome P450 AT5G07990 40.784 1.04e-131 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2272 K20623 - gmx:100791502 645.966