Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2269 ATGATAAGTCAAACAAGTGTAACAAACAGATCTCCTTTTACAGCAATTCAATGGCAGGAACTTGAACAACAAGCTCTTATTTTTAAATACCTGGTCTCAGGGAGCCCAATCCCACCTGATCTCATTTACTCTGTCAAAAGAAGCCTAGACTCTTCACTGTCTTCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAAGTAGGAATGAAGCATGTTATTTCGTGGTTATTAAAGATTATGTTTCAGTTTTTATTCTCTTTTACTTCTTCTTTTTAATCTATATTGCTGCAGTTGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCCTATCCGGACTCAAAATACTGTGAGAGGCACATGCACAGGGGGAGAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAGCAACAGCAACAACTGGAATTTCAACAAACACATCACAGCCAGTCTCTTCATCATGTAGTAACACAAGCCTTACCATGATCAATCCCAATCCACCCTCAACAACTTCTTTCCCTCTCGCTATATTGCCCTCTTCTATGCCCTCTGATTCCCAACCTTATTATTCCCATATTTACCAAAACTCTTCTCTCAGCCCCTTGTTCTACACCCATTCAACCTCATGTAGACCTCTGGACTATGATTTTCCTTCTCAAAAAAGCAATACCCACCAGCTATTTTTAGACTCTGGATCTTATTCTAGGGATGAGTACTATAGGCATGTTCATGGAATGAGGGGAGGTGTGGATGAAAGAGCTTTCTTCCCAGAAGCCTCAGGGGGCGTTAGGAGCTTTCCTGATTCCTATCAACAATTACCAATGAGCTCCTGTGAACCTCATTCAAAGTCACAGTTCCCAAACATGAATGATAATCCAACTCCAAGGCAACAAGAAGGGCAACATTGCTTTGTTCTGGAAAGAGACTTCAAATCACCAGGACAACTAAAGCATGAGAGTGAAACTGAGATGACCCAGAGATCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGGACACAGATTCCTGGCTTGATCTTGCTTCAAATTCCAGAATCCCCTAA 1128 0.4246 MISQTSVTNRSPFTAIQWQELEQQALIFKYLVSGSPIPPDLIYSVKRSLDSSLSSSSSRLFPFHPSRNEACYFVVIKDYVSVFILFYFFFLIYIAAVGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSATATTGISTNTSQPVSSSCSNTSLTMINPNPPSTTSFPLAILPSSMPSDSQPYYSHIYQNSSLSPLFYTHSTSCRPLDYDFPSQKSNTHQLFLDSGSYSRDEYYRHVHGMRGGVDERAFFPEASGGVRSFPDSYQQLPMSSCEPHSKSQFPNMNDNPTPRQQEGQHCFVLERDFKSPGQLKHESETEMTQRSLHHFFGEWPPKDTDSWLDLASNSRIP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2269 375 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci12g2269 375 ProSiteProfiles WRC domain profile. 111 155 IPR014977 -
Prci12g2269 375 Pfam QLQ 12 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci12g2269 375 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci12g2269 375 MobiDBLite consensus disorder prediction 159 178 - -
Prci12g2269 375 Pfam WRC 112 154 IPR014977 -
Prci12g2269 375 PANTHER GROWTH-REGULATING FACTOR 5 11 366 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci12g2269 375 MobiDBLite consensus disorder prediction 292 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2269 Prci-Chr12 40393480 40395284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2269 10 356 GRF Transcription Factor Family AT3G13960 36.049 5.67e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci12g2269 WRC 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2269 - - pcin:129287482 751.895