Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2268 ATGATAAGTCAAACAAGTGTAACAAACAGATCTCCTTTTACAGCAATTCAATGGCAGGAACTTGAACAACAAGCTCTTATTTTTAAATACCTGGTCTCAGGGAGCCCAATCCCACCTGATCTCATTTACTCTGTCAAAAGAAGCCTAGACTCTTCACTGTCTTCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAATTGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCCTATCCGGACTCAAAATACTGTGAGAGGCACATGCACAGGGGGAGAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAGCAACAGCAACAACTGGAATTTCAACAAACACATCACAGCCAGTCTCTTCATCATGTAGTAACACAAGCCTTACCATGATCAATCCCAATCCACCCTCAACAACTTCTTTCCCTCTCGCTATATTGCCCTCTTCTATGCCCTCTGATTCCCAACCTTATTATTCCCATATTTACCAAAACTCTTCTCTCAGCCCCTTGTTCTACACCCATTCAACCTCATGTAGACCTCTGGACTATGATTTTCCTTCTCAAAAAAGCAATACCCACCAGCTATTTTTAGACTCTGGATCTTATTCTAGGGATGAGTACTATAGGCATGTTCATGGAATGAGGGGAGGTGTGGATGAAAGAGCTTTCTTCCCAGAAGCCTCAGGGGGCGTTAGGAGCTTTCCTGATTCCTATCAACAATTACCAATGAGCTCCTGTGAACCTCATTCAAAGTCACAGTTCCCAAACATGAATGATAATCCAACTCCAAGGCAACAAGAAGGGCAACATTGCTTTGTTCTGGAAAGAGACTTCAAATCACCAGGACAACTAAAGCATGAGAGTGAAACTGAGATGACCCAGAGATCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGGACACAGATTCCTGGCTTGATCTTGCTTCAAATTCCAGAATCCCCTAA 1035 0.4377 MISQTSVTNRSPFTAIQWQELEQQALIFKYLVSGSPIPPDLIYSVKRSLDSSLSSSSSRLFPFHPIGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSATATTGISTNTSQPVSSSCSNTSLTMINPNPPSTTSFPLAILPSSMPSDSQPYYSHIYQNSSLSPLFYTHSTSCRPLDYDFPSQKSNTHQLFLDSGSYSRDEYYRHVHGMRGGVDERAFFPEASGGVRSFPDSYQQLPMSSCEPHSKSQFPNMNDNPTPRQQEGQHCFVLERDFKSPGQLKHESETEMTQRSLHHFFGEWPPKDTDSWLDLASNSRIP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2268 344 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci12g2268 344 MobiDBLite consensus disorder prediction 128 147 - -
Prci12g2268 344 Pfam QLQ 12 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci12g2268 344 MobiDBLite consensus disorder prediction 261 288 - -
Prci12g2268 344 PANTHER GROWTH-REGULATING FACTOR 5 11 335 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci12g2268 344 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci12g2268 344 ProSiteProfiles WRC domain profile. 80 124 IPR014977 -
Prci12g2268 344 Pfam WRC 81 123 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2268 Prci-Chr12 40393480 40395284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2268 10 325 GRF Transcription Factor Family AT3G13960 38.770 1.66e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci12g2268 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2268 - - pcin:129287482 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2268 12 40393480 40395284 Prci12g2268 12 40393480 40395284 ECH