Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2266 ATGAGCGATTGGATGGGGTTTTCTCTGACTCCACACTTGAGGATTGATGAAGTATATGGGAATGGCAGAGAGAACCAAGAAGAACACCGTGGAGGCTATCCTTCTCCTCATCATCGCTTGTCGGTTATGCCTTTAAGATCAGATGGCTCTCTCTGTGTTGCTGACCCTTTTAGGCACCCTGGTGCAGCTGAAGAATGGAGATATGATCATGGAGTAGTAGGCGGAAGCTCAAATGAAGAAGGTCCAAAGCTTGAAGATTTCTTGGGTTGTTACTCAAACTCCTCTGATATTGCTGAAACCAAAGTGTATTGCCCGGGCAGTACGCAACAAGAAGACCAAAACCAGAACCAGAACAGCATTTCCAGCAGAATCAATGTGAATGTGGCCCCAATCTTCAGTACCAACGCGGAGATAGAAGCTGATGGGGAAAATTTCTCAAACGCTCCTTCCTTAATCCAACCGTTTCATGCGTACAATGATAATAACTCTCGAGCTGTAATCCCCAACAATGGCATGTACAAGTCCTGGTTGGCCCAATCTCAATCTTGTGCTGAAGTAAATGGCTATAGCTACCAATCTCTAGCCCTAACTATGAGTCCAAGTCTACCAAACACTCTCTCTGGTGCAATTTCCCGGCCGGTTCAAGTGGAAGATGATGCTCGTAAAAGGTCAATGACAAAATCTCTTGCGGTTAGAGAACCTGTGCCCCGCAAATCTATTGATACCTTTGGTCAAAGAACATCTCAATATAGGGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGGTGGGTATGATAAGGAAGAAAAAGCAGCGAGGGCTTACGACTTAGCTGCACTCAAGTATTGGGGTCCAACCACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACTAGGCAAGAATTTGTGGCCAACTTGAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCTTCTGTGTATAGGGGCGTGACAAGACACCATCAACATGGAAGGTGGCAAGCTAGGATTGGTAGAGTTGCAGGAAACAAGGACTTGTATCTCGGCACATTTAGCACACAAGAGGAGGCTGCAGAAGCATATGATATTGCAGCAATAAAGTTCAGGGGGACGGGCGCTGTGACCAATTTCGATATAAGCAGGTATGACGTGAAGAGAATATGCTCCAGCTCCACTCTCATTGCCGGAGATCTGGCAAAGAAGTCTCCAAAAGACTTGGCTAGTCCCGGTGTCGCCACCACAACGGACGACTTCAATTCTAACGCATCGACGTCATTGACGACAGCAGCTCATCAGCAACAGCCACAGCCCTCTTTTACTGTAACAAATGGTGAACACTCTTCCGATGAGTTGGCCAACATGGTTTGGAATGACGATGGGAACCCCAACGAGAAACAGGTCAACGATCACAGTACTTCGGAGAACGGCAAGAATAATGATAAGAATGCGTCAAACCCAGAAGAAAGTCCCAAGTGTTCAGTGGAATTAATGGGAAATGAGTTTGGGGTGAGTGGTTCAGAGTTTGGACCCGGGTTCTTCTCGTTGCAGGGGCCAAAGTATAACAATGATGACGACGATGATGGGAACAACGACGACAACGGTAATGATAACTTGAATAATGACAATCGCATTGGGAACATGGGTCTGGTCCATCAAGTTCCTGTGTTTGCTTTGTGGAATGAATGA 1770 0.461 MSDWMGFSLTPHLRIDEVYGNGRENQEEHRGGYPSPHHRLSVMPLRSDGSLCVADPFRHPGAAEEWRYDHGVVGGSSNEEGPKLEDFLGCYSNSSDIAETKVYCPGSTQQEDQNQNQNSISSRINVNVAPIFSTNAEIEADGENFSNAPSLIQPFHAYNDNNSRAVIPNNGMYKSWLAQSQSCAEVNGYSYQSLALTMSPSLPNTLSGAISRPVQVEDDARKRSMTKSLAVREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTGAVTNFDISRYDVKRICSSSTLIAGDLAKKSPKDLASPGVATTTDDFNSNASTSLTTAAHQQQPQPSFTVTNGEHSSDELANMVWNDDGNPNEKQVNDHSTSENGKNNDKNASNPEESPKCSVELMGNEFGVSGSEFGPGFFSLQGPKYNNDDDDDGNNDDNGNDNLNNDNRIGNMGLVHQVPVFALWNE 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2266 589 MobiDBLite consensus disorder prediction 535 573 - -
Prci12g2266 589 FunFam AP2-like ethylene-responsive transcription factor ANT 248 314 - -
Prci12g2266 589 CDD AP2 248 314 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 FunFam AP2-like ethylene-responsive transcription factor 347 408 - -
Prci12g2266 589 Gene3D AP2/ERF domain 348 408 IPR036955 GO:0003700|GO:0006355
Prci12g2266 589 Gene3D AP2/ERF domain 248 314 IPR036955 GO:0003700|GO:0006355
Prci12g2266 589 SUPERFAMILY DNA-binding domain 347 408 IPR016177 GO:0003677
Prci12g2266 589 CDD AP2 347 408 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 78 496 - -
Prci12g2266 589 SUPERFAMILY DNA-binding domain 248 314 IPR016177 GO:0003677
Prci12g2266 589 SMART rav1_2 249 318 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 SMART rav1_2 348 412 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 PRINTS Ethylene responsive element binding protein signature 388 408 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 ProSiteProfiles AP2/ERF domain profile. 249 312 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 MobiDBLite consensus disorder prediction 436 478 - -
Prci12g2266 589 ProSiteProfiles AP2/ERF domain profile. 348 406 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 Pfam AP2 domain 249 304 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 Pfam AP2 domain 347 398 IPR001471 GO:0003700|GO:0006355
Prci12g2266 589 MobiDBLite consensus disorder prediction 429 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2266 Prci-Chr12 40340206 40343808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2266 1 431 AP2-EREBP Transcription Factor Family AT1G72570 52.371 1.76e-134 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci12g2266 AP2 1.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2266 K09285 - gmx:100809762 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2266 12 40340206 40343808 Prci12g2266 12 40340206 40343808 ECH