Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2265 ATGGCTTCTGGGACTGATAATTGTATGAAGAGGAAAGGGAAGCCAGTCGAAGCCGTGACGAATGTGCCTCTTAGCAAAGCAGCTTGGACACCAGAAGAAGATAAGAAACTAGCTGAGGTTATTGCAGTTCATGGGGCAAAAAGGTGGAAGTCCATTGCATCCAAAGCAGGTCTAAATCGGTGTGGCAAGAGTTGTAGGTTGAGATGGTTAAACTATCTCAGACCCAACATCAAGAGGGGAAACATATCAGACCAGGAAGAGGATTTGATTCTTCGGCTTCATAAACTCCTTGGAAACAGGTGGTCTTTAATCGCCGGGAGACTACCAGGCCGAACAGATAATGAGATAAAGAATTATTGGAATTCTCATTTGAGCAAGAAGATAAAGCAGATAGAGGAGCACTCGAGTGGGAGTTCAAAAAGAGAAGAGAAACAAGAGGTGGCGGTAGAGAAGAAGATCCCTGAAGAAGCTGAGCTAACTAGAGAAGAGATTTCCACTGAGGAAGCTGAAGACTCATCATCAAAACCCAATTTTGATGTGGATGGCTTCTTTGATTTTTCAGTAGATGAAGGTCCATTGAATCTGGAGTGGGTTAGCCAGTTCCTTGAACTTGATGAAACAACTCTTGGACTCTTCTCACAATAA 645 0.4341 MASGTDNCMKRKGKPVEAVTNVPLSKAAWTPEEDKKLAEVIAVHGAKRWKSIASKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQIEEHSSGSSKREEKQEVAVEKKIPEEAELTREEISTEEAEDSSSKPNFDVDGFFDFSVDEGPLNLEWVSQFLELDETTLGLFSQ 214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2265 214 MobiDBLite consensus disorder prediction 131 175 - -
Prci12g2265 214 FunFam MYB-related transcription factor 25 78 - -
Prci12g2265 214 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Prci12g2265 214 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 21 165 - -
Prci12g2265 214 CDD SANT 28 73 IPR001005 -
Prci12g2265 214 CDD SANT 83 124 IPR001005 -
Prci12g2265 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Prci12g2265 214 MobiDBLite consensus disorder prediction 131 178 - -
Prci12g2265 214 SMART sant 78 126 IPR001005 -
Prci12g2265 214 SMART sant 25 75 IPR001005 -
Prci12g2265 214 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Prci12g2265 214 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Prci12g2265 214 Gene3D - 83 155 - -
Prci12g2265 214 Gene3D - 27 78 - -
Prci12g2265 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Prci12g2265 214 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Prci12g2265 214 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci12g2265 Prci-Chr12 40326794 40328286 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2265 9 193 MYB Transcription Factor Family AT5G40330 51.351 3.36e-53 168
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci12g2265 Myb_DNA-binding 1.2e-18 CL0123