Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2251 ATGGCGCACTCACAGTCACAGGATTATCGTTCCCAATCCAAGCCTCTCGACAATCAACCACAGAAAAAGCAACCACTAGAAAGAGACGAGCAAGATGAAGAGAGCTTTTCTTACGCCATGCAGCTCGCGACCTCTTCTGTGATGTCCATGGCAGTGCAAACGGTGGCCGAGCTTGGCATTTTCGACATCATTCGCAGAGCCGGTCCCGACGCTAAGCTTTCTGCCGCCGAGATCACGTCACAACTATCTTGCAAGAACACTGAAGCGCCTTCCGCGGTCGATCGTCTTCTCCGACTTCTAGCATCTCACTCTGTTCTTTACTGTTCCGTTATCGCCGATGAAAATCAAGGAAGACCGGGATGTTTCCGGCGGTTGTACAGCCTTGCTCCGGTGGCCAAATTCTTTGCGCGAGATGCTGACGGGGTGTCGTTGGGCCCTATGATTGCATTATACCATGATAAGGTCCTCCTTGATAGTTGGTCGCAGATGAAGGAAGCAATATTGGAAGGTGGTATTGCCTTCAACAGGGTCCATGGCTCGCATGTATTTGAGTATCCAGGATCAGATTCGAGGTTCAACGATGCATTTAACAAAGCAATAGCTAACGCAACCACTTTAATTATGACCAAGATTCTTGAATTCTACAAGGGCTTTGAAGACATCACTCTACTTGTCGATGTTGGTGGTGGTCTTGGGATTACTCTCTCCTTGATCACTTCTAAACATCCTCATATTCAAGGAATCAATTTCGATTTGCCTCATGTCATTCGACATGCTCCTCCTTTTCCTAGAGTGGAACATGTTGGAGGTGATATGTTTGAAAGTGTGCCTAAGGGAGATGCCGTCTTGCTGAAGTGGATGCTTCATGATTGGAGTGATGAATGGTGCATGAAACTATTGAAGAACTGCTACGATGCGATCCCAAAAGATGGAAAGGTGATTGTGGTGGAGGCAATTTTTGGCGTCATGGCAGATACTTCTGCTGCTACCAAGTGCATCTCCCAATCTGATGTGCATATGCTGACTCAGTGCCCAGGAGGCAAAGAGAGAAGCGAGCAAGAGTTCATGGGATTAGCTACATCAGTTGGGTTTCAAGGCATTAGATTTGAATGCTTTGCTCGTAACTATTGGGTTATGGAGTTCTTCAAATAG 1152 0.4688 MAHSQSQDYRSQSKPLDNQPQKKQPLERDEQDEESFSYAMQLATSSVMSMAVQTVAELGIFDIIRRAGPDAKLSAAEITSQLSCKNTEAPSAVDRLLRLLASHSVLYCSVIADENQGRPGCFRRLYSLAPVAKFFARDADGVSLGPMIALYHDKVLLDSWSQMKEAILEGGIAFNRVHGSHVFEYPGSDSRFNDAFNKAIANATTLIMTKILEFYKGFEDITLLVDVGGGLGITLSLITSKHPHIQGINFDLPHVIRHAPPFPRVEHVGGDMFESVPKGDAVLLKWMLHDWSDEWCMKLLKNCYDAIPKDGKVIVVEAIFGVMADTSAATKCISQSDVHMLTQCPGGKERSEQEFMGLATSVGFQGIRFECFARNYWVMEFFK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2251 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 381 IPR029063 -
Prci12g2251 383 MobiDBLite consensus disorder prediction 1 20 - -
Prci12g2251 383 Pfam O-methyltransferase domain 160 365 IPR001077 GO:0008171
Prci12g2251 383 MobiDBLite consensus disorder prediction 21 35 - -
Prci12g2251 383 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 40 383 IPR016461 GO:0008168
Prci12g2251 383 Pfam Dimerisation domain 50 101 IPR012967 GO:0046983
Prci12g2251 383 PIRSF O-mtase 17 383 IPR016461 GO:0008168
Prci12g2251 383 Gene3D - 17 135 IPR036388 -
Prci12g2251 383 Gene3D Vaccinia Virus protein VP39 136 383 IPR029063 -
Prci12g2251 383 SUPERFAMILY "Winged helix" DNA-binding domain 29 138 IPR036390 -
Prci12g2251 383 PANTHER O-METHYLTRANSFERASE 39 369 IPR016461 GO:0008168
Prci12g2251 383 FunFam Caffeic acid 3-O-methyltransferase 18 135 - -
Prci12g2251 383 FunFam Caffeic acid O-methyltransferase 136 383 - -
Prci12g2251 383 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2251 Prci-Chr12 40051348 40055275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2251 32 383 Monolignol Biosynthesis Gene Families AT5G54160 50.568 1.13e-128 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2251 K13066 - zju:107418659 485.723