Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2230 ATGATTCTCATACATTCAGGTATTAATTACAACTATGCAAAGATTGAGTTACTATTGAGAGAGTTTCAAACCATTGGAATTTGGGGCATGGGTGGCATTGGTAAAACAACTCTTGCCAAAGCTACATTTGTCAAACACTCTCCCCATTATGAAGGTTGTTGCTTCTTGGCAAATGTAAGGGAAAATTCTGCAAAGCATGATAGTGGACTTGAGGATTTACGCTATAAACTTCTCTCCTGTCTGCTACCAGAAGAAGATCTCTTTACTGGAACTTTAACCTCTTTTCTTGAGTCTAGGGTTAGTCGTAAAAAGGTTTTCATTGTTCTTGATGCTGTTAGTACTTTAGAGCAATTAGAGTACTTGGTTGGGGAACCTCATTGCTTTAGTCTAGAAAGTAAAATTGTCATCACATCAAGGGACAAGCATGTGCTTAGCAAAGGAGTTGATGTGATATATAAGGTCAAAGAATTGAAGTTCCAAGAATCCCTTGCGCTTTTAAGCTTGAATGCCTTCAACCAAAATCTGCCTATAACAGGATATAAGGAGTTATCAGAAAAGGCAGTTGTTTATGCAAAAGGAATTCCATTAGCTTTAAAAGTTTTGGGTTCATTTCTTCATGGCAAAAGTAAAATTGAATGGAAGAGTGCATTAAGAAAACTTGTAAAGATTCCCCATGAAGATATTCAGAAGGTGTTAAGATTGAGTTATGATGGATTAAATCATGAAGAGAAGAACATATTTCTGGAGATTGCATGCTTTTTGAAGGGAATGTTGAAAGAACATGTGATTAGCCTATTGGATGGCTATGACTTCTATGGAGCTATTGGCATAAGAACACTTCATGATAAGGCTCTCATAATTGCAAATGATCACATGCCTTTAGAAATGCATGATTTGATACAGGAAATGGGTTGGGAAATTGTTCGTGAAGAATCTATCAATGAACCTGAACGACGGAGTCGATTATGGGATTGTGAAGAAGTCTATGATGTCTTGGCTAATGACAAGGGCACCGATAAAGTTGAAGGCATAATGTTAGATGTGTCTCGAATCAAAGATATACATTTAAGTGCTCGCACTTTCAAAAGGATGCCTAATATGCGATTTCTCAAATTTTTCTCTGCTTTAAACCATCACTCAAGTCATGTGTATTTACCAAAAGGTCTCAAGTTCTTTCCTAACAAAATAAAGTATCTAGAGTGGTATGGATATCCACTTAAATCTCTGCCACCAACTTTTTGTCCTGAAAATCTCGTTGAGCTTCACATGCCCAATAGCCATGTTAAAAAGCTTTGGAATGGAGTGCAGGATCTTGTGAACTTAAAAGAGATAAACCTTAACGGATGCAAACAATTGAAGGAGCTGCCAAATTTCTCTAAAGCCTCAAGTCTTAAGGTAGTATCTCTTGTTGATTGTGAGAGTTTGCATTACGTTCATTCTTCTATTTTGTCTCTTCACTCACTTGTTGAATTGGAGTTAAGTGGGTGCAAGAAACTCAAGAGTCTAAAAACTAAGTTTCATTTAAAATCTCTACAATACATTCGGGTGGAAGAATGCACAAGTCTCAAGGAATTTTCAGTGTCATCGGAAAAAATAAGGGAGTTGAATTTATGCCACACTGGAATCGAAAATTTGCACTCATCCATAAGGCATTCAAGTAATCTGGAAGTGCTGGATCTGGGTGGCTTAAGACTGAAGAAAATTCCAGAACAGTTATCATGCTTGAGAACATTGACAATGGTCAGGCTTCCTAATTGTGAAGTGCTTGATAATTCGATGCTATATAGGCTATTTGGTGGCATGTTGGCTCTAACTGTAGTGTATTTGACAGACTGTAGTCACATAACTGAACTCCCCAATAACACTGAACATCTTTTAAGATTGGAATGTCTGTTCATATCGAATTGCAGGAAGCTTCGTTCTTTACCAAAACTTCCACCATCCATTACAACCTTAGATGCTTATAACTGCATGTCATTAGAGATAGTGTCAACTTTTAGGCCACTGAACGTGAGTGAAAAATACTTCTCATTTATGAATTGCGTGAAACTGAATGAACAATCACTTCACAGTATCATAGAAGATGCCTATTCTGTGATCAATAGAGCTGCTTGCGAATTTCAGCAAGAAAGAAAGGCTAAAGGTGCTCGTAGTTTGATTTGCTTTCCTGGACGAACAGTACCTGAGTGGTTCAAATATCGGACAGCAAAGGGCTCCATGATTATTGAAGTCCTTCAAAATTCAGACTTGTTGGGTTTTTCTCTGTGTGTCGTTCTTCAGTTTCACTCAGAAAAGACATGTTATGTTGCATTGAAATGTGCGTGCCACATGGGAGATTCTAAGGTGTCAGATTTACCGTACAACAATCTGTTTCTTCCAAATATGAATTCTGATCATGTTTACATATGGAAGAATGAGTTTGCTTCGGATGAGATATTGAAGGTGATTGAAAGAATAAGAGGAAATAATCAAGAGTTGGTCACTGACATAAAACTTTGCTTTGAATTCAGTGTAGAACCTCGTTTTGGGTACGAGGTTGCTAATATCAACGAGGTAGTTGGTATCAAAGAATGTGGGGTGTGCCCATTATATGTCTCTGATTATCAGAAATTCTCTCTGCAAATGGAATTGGAGAAGAATAAGAAGAGGCCTCGAGATGTTGATGAACAACCACCACTTCTTCAGTTGAAGAAACGGAAACTTTATTATGATTCTCATACCAACTCATGTCATGATATTGAGGAACTGGACGCTCTTTTCATGACAATTAATATCACTTGA 2781 0.3743 MILIHSGINYNYAKIELLLREFQTIGIWGMGGIGKTTLAKATFVKHSPHYEGCCFLANVRENSAKHDSGLEDLRYKLLSCLLPEEDLFTGTLTSFLESRVSRKKVFIVLDAVSTLEQLEYLVGEPHCFSLESKIVITSRDKHVLSKGVDVIYKVKELKFQESLALLSLNAFNQNLPITGYKELSEKAVVYAKGIPLALKVLGSFLHGKSKIEWKSALRKLVKIPHEDIQKVLRLSYDGLNHEEKNIFLEIACFLKGMLKEHVISLLDGYDFYGAIGIRTLHDKALIIANDHMPLEMHDLIQEMGWEIVREESINEPERRSRLWDCEEVYDVLANDKGTDKVEGIMLDVSRIKDIHLSARTFKRMPNMRFLKFFSALNHHSSHVYLPKGLKFFPNKIKYLEWYGYPLKSLPPTFCPENLVELHMPNSHVKKLWNGVQDLVNLKEINLNGCKQLKELPNFSKASSLKVVSLVDCESLHYVHSSILSLHSLVELELSGCKKLKSLKTKFHLKSLQYIRVEECTSLKEFSVSSEKIRELNLCHTGIENLHSSIRHSSNLEVLDLGGLRLKKIPEQLSCLRTLTMVRLPNCEVLDNSMLYRLFGGMLALTVVYLTDCSHITELPNNTEHLLRLECLFISNCRKLRSLPKLPPSITTLDAYNCMSLEIVSTFRPLNVSEKYFSFMNCVKLNEQSLHSIIEDAYSVINRAACEFQQERKAKGARSLICFPGRTVPEWFKYRTAKGSMIIEVLQNSDLLGFSLCVVLQFHSEKTCYVALKCACHMGDSKVSDLPYNNLFLPNMNSDHVYIWKNEFASDEILKVIERIRGNNQELVTDIKLCFEFSVEPRFGYEVANINEVVGIKECGVCPLYVSDYQKFSLQMELEKNKKRPRDVDEQPPLLQLKKRKLYYDSHTNSCHDIEELDALFMTINIT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2230 926 Gene3D - 10 151 IPR027417 -
Prci12g2230 926 FunFam Disease resistance protein RPS4 338 530 - -
Prci12g2230 926 SUPERFAMILY L domain-like 296 688 - -
Prci12g2230 926 Gene3D - 157 240 IPR042197 -
Prci12g2230 926 PRINTS Disease resistance protein signature 191 205 - -
Prci12g2230 926 PRINTS Disease resistance protein signature 99 113 - -
Prci12g2230 926 PRINTS Disease resistance protein signature 24 39 - -
Prci12g2230 926 PRINTS Disease resistance protein signature 483 499 - -
Prci12g2230 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 248 IPR027417 -
Prci12g2230 926 Pfam NB-ARC domain 20 236 IPR002182 GO:0043531
Prci12g2230 926 Pfam C-JID domain 722 867 IPR045344 -
Prci12g2230 926 Gene3D Ribonuclease Inhibitor 506 662 IPR032675 -
Prci12g2230 926 Gene3D Ribonuclease Inhibitor 344 505 IPR032675 -
Prci12g2230 926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 526 IPR044974 GO:0006952
Prci12g2230 926 Pfam Leucine Rich Repeat 417 436 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2230 Prci-Chr12 39854847 39859412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2230 21 665 WRKY Transcription Factor Family AT4G12020 34.644 2.20e-90 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2230 - - pcin:129288061 1818.9