Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2215 ATGGCGAAAATGAGCATGAGTGAGAGCGATGCCGAGGAAGAATCGGCACAAGAAGTTCAAGTCCCGACTGATATTGATTGGCATATGCTTGATAAATCGAAGTTTTTCTTCCTCGGTGCTGCCCTTTTCTCAGGGGTTTCAGCAACTTTGTACCCGATTGTTGTATTGAAAACCAGGCAGCAAGTAGCTCAATCCCGAGTTTCTTGTATTCAAGCTGCATTTTCACTTGTCAGGCATGAGGGTTTCCGAGCATTGTACAGAGGTTTTGGTACTTCCTTGATGGGTACAATTCCAGCTCGAGCACTGTATATGGCTGCCCTGGAGATTACTAAGAGTAATGTAGGTACTGCCACGGTTAAGTTAGGATTTGCAGAACCAACTGCAGCTACTATTGCCAATGCAGCTGCAGGTTTGAGTGCTGCCATGGCAGCACAACTTGTGTGGACCCCCGTTGATGTGGTGAGCCAAAGGTTGATGGTTCAAGGTGGTTATAATTCAAATAATTCTAAGGCTTCAGCACATCTGTATGTCAATGGGATTGATGCATTCAGGAAAATTCTGATCACTGATGGTCCCAGAGGTTTGTATAGGGGGTTTGGGATATCTATTTTGACGTATGCACCATCAAATGCAGTTTGGTGGGCTTCATACTCGGTTGCACAAAGGCTGATTTGGAGTGGAATTGGGTATTACTGGGGCAAGAGAGATGATAAGGTCAGCAATTTGGCAGCTGATGTATTGAGGCCAGATTCAAAAACCGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCTGCCCTAATTACCATGCCATTAGACACAATCAAGACAAGACTTCAGGTCTTGGATAGTGATGAGAATGGTCGTCGAGGACCAACAGTTATGCAGACTGCGAGGAAATTGCTTAAGGAAGGTGGTTGGATGGCCTGCTACAGAGGGTTAGGACCTCGATGTGCTTCAATGTCAATGTCTGCGACAACAATGATCACCACATACGAGTTTTTAAAACGGCTTTCGACAAAGAATCAAGACGTTCTGACAAGATAG 1059 0.4551 MAKMSMSESDAEEESAQEVQVPTDIDWHMLDKSKFFFLGAALFSGVSATLYPIVVLKTRQQVAQSRVSCIQAAFSLVRHEGFRALYRGFGTSLMGTIPARALYMAALEITKSNVGTATVKLGFAEPTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGYNSNNSKASAHLYVNGIDAFRKILITDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWSGIGYYWGKRDDKVSNLAADVLRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDSDENGRRGPTVMQTARKLLKEGGWMACYRGLGPRCASMSMSATTMITTYEFLKRLSTKNQDVLTR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2215 352 PRINTS Mitochondrial carrier protein signature 88 108 IPR002067 GO:0055085
Prci12g2215 352 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Prci12g2215 352 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Prci12g2215 352 PRINTS Mitochondrial carrier protein signature 262 284 IPR002067 GO:0055085
Prci12g2215 352 SUPERFAMILY Mitochondrial carrier 29 339 IPR023395 -
Prci12g2215 352 Gene3D Mitochondrial carrier domain 34 350 IPR023395 -
Prci12g2215 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 342 IPR018108 -
Prci12g2215 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 223 IPR018108 -
Prci12g2215 352 Pfam Mitochondrial carrier protein 42 113 IPR018108 -
Prci12g2215 352 Pfam Mitochondrial carrier protein 130 224 IPR018108 -
Prci12g2215 352 Pfam Mitochondrial carrier protein 256 346 IPR018108 -
Prci12g2215 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 14 347 - -
Prci12g2215 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 113 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2215 Prci-Chr12 39787659 39791653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2215 6 348 Chloroplast and Mitochondria Gene Families AT1G72820 73.410 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2215 K15121 - qsa:O6P43_027580 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2215 12 39787659 39791653 Prci12g2215 12 39787659 39791653 ECH