Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2175 ATGGGACTACGTAAATTAAGAGCGAAGATTAAAAGGAGCCATCTTTACACGTTTGCTTGTCTTAGGCGGAGTCACACTGCACATGAGAATGGTCAGAACCTTGAAGGTCCTGGTTTTTCAAGAGTTGTACACTGCAACCACCCTCATCTCCATGAAAAGAAGCCTCACTTTTACTGCCGGAATGATATATCAACTACAAAATACAATATTATAACCTTTTTACCTAAGGCACTCTATGAGCAATTTCGCCGGGTTGCTAATGTATACTTCCTTGTGGCTGCATGCCTTTCTGCCTCTCCAATTTCACCATTCTCTCCGCTGAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTGGCGCAGGTTTCGTCAGGATGTCAAAGTTAATCACCGGAAAGCTAGTGTCCATAAAGGCAATGGTGTTTTTGATCTCAAGCAATGGCAGGACATTGTGGTTGGGGATGTAGTAAAAGTAGATAAAGATCAATTTTTTCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTAAAGGTAAAAAGATCTTTGGAGGTTACCATGCTTCTATATAATGATGAATCTTTTAAGGATTTCATTGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTATCGGAAATTTTGAGTATGAACGTGAGGTTCATCCGATTGAGCCCAGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAACACTGATTTCATATATGGAGTTGTCGTTTTCACTGGTCATGAAAGTAAAGTTATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGCAGAATAGAGAGAAAGATGGATTACATCATATACCTTCTATTTACTGTTCTTATTTTGATATCCTTGGTCAGTTCAGTAATATTTGCCGCAATCACTAGATTTCAAACTATAAATTGGTGGTATTTGATGCCCATGCAATCGGAGGTCCAATATGATCCCAATAATGCTGCATTGGCTGGGTTAAGTCATCTGGTTACCGCACTCATTCTTTATGGATATTTGATACCCATATCACTTTACGTTTCAATTGAGGTTGTGAAGGTTTTACAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCATGAAGAAACTGGGACCCCAGCTAGTGCTCGAACATCAAATCTGAATGAAGAGTTGGGTCAAGTGGACACCATACTTTCTGACAAGACTGGAACTTTAACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGCTGCATATGGTGTGAGTTCCAGTGAAGTTGAGCTTGCTACAGCACAGCAGATGGCTCTTGAACTTGAGGAAGACCAGCAGGATGGTCTCTCCAAAACACCCACACATGAGGGCAAGGCATCTGTTTCGTGGGAAAACGTTGACCTGGAGACTGTTGTTACTTCCACGGATGATGAGGCTCAGAAGGCTACTATAAAGGGTTTCAGATTTGAGGATGGTCGTCTCATGAACTGTAACTGGTTGAAAGAGCCCAATCCTGATGTCCTTTTATTGTTTTTCCGAATATTAGCTGTTTGCCACACTGCCATTCCTGAGCTGAATGAGGAGACAGGAACTTTAACTTATGAGGCTGAATCCCCTGATGAAGGCTTTCTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGTAAAAGAACTCAAGCAAGTGTTTTCATCCGTGAAAAGCTTTCACCTTCTGAACAAGCTGTTGAAAGGGAGTACAAAATCCTGAATCTGTTGGACTTTACTAGCAAAAGAAAACGAATGACAGTGATTGTGCGCGATGAGGAGGGAAGTTTACTTCTTATGGCAAAGGGGCTGACAGGTTATATCATATTTGATCGACTATCAAAGAATGGAAAGACGTATTTAGAGGCTACAACCAAACATTTGAATGAATACGGAGAAAATGGTTTGAGAACATTGGCTCTAGCTTACAGAAAGCTTGATGAGGAAGAGTACAATGCTTGGAACAATGAGTTTCAGAAAGCCAAAACGACTGTTGGGCCTGACAGAGAGGCAGTGCTTGAGGAATTAGCTGAAAGAATGGAAAAAGAGCTAATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTTCCCCAATGCATTGACAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATAGGTTTTTCTTGTAGTTTGCTTCGACACGGCATGAAGCAGATCTGCATATCTATTCAAGAGGCAGACTTAGTTACCAATTTTGACAAAGAGGCCATTAAGGAGGGCATTTTGAATCAAATCATCAATGCCTCACAAATGATAAAGCTGGAGACAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTAGCATATACTTTAGAAGATGATATGAAGCATCAATTTTTGGGATTGGCTGTTGATTGTGCTTCTGTCATCTGCTGCCGTGTGTCTCCCAAGCAAAAGGCGTTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATTGGTATTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCGCTATTGCCCAATTTAGATTTTTGGAACGACTTTTGGTGATCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGGCTCACCATCTTTTATTTTGAGTCCATGACGAGCTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTAACATCATTACCTGTCATTTCGCTTGGAGTATTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCTCTATACCAGCAAGGCCCTAGAAATGTGTTTTTTGACTGGTTTAGAATATTGGGATGGATGCTCAATGGTCTATTTTGCTCCCTCGTTGTCTTCTTATTCAACATCTGCATTTTCTCTGACCAAGCGTTTCGAGGGGATGGCCGGACCTCTGATATGGCTGTTGTTGGTACCACGATGTTCACTTGCATAATATGGGCTGTCAACTGCCAGATTGCCCTCACAATTTGCCATTTCACATGGATGCAATACATATTTATCATAGGCAGTATAGCCTTTTGGTACATATTCCTGGTGCTATATGGCATGCTTTCACCAAATTATTCAAAAACTGCCTACCAAATCCTGCTTGAAGTTCTTTCTCCTGCCCCAATGTATTGGTTGGTGACTTTTCTAGTAACAGTTACTTGCAATTTTCCTTATTATGCCCATGTATGCTTTCAAAGATGGAAAAGTCCTTTGGATCATCACATTATCAGAGAGATCAAGCACTACAAGAAGGACGTAGAGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCAAGACAGAAAACCAATATTGGGTTCAGTGCAAGAGTGGAAGCTAAGATGAGGAATTTGAAGCATAAGCTGCATAGGAAGCAATCAGCCTTGCCTTTCATGTCTTCTCCAGACGGACATTACAAATGA 3678 0.4097 MGLRKLRAKIKRSHLYTFACLRRSHTAHENGQNLEGPGFSRVVHCNHPHLHEKKPHFYCRNDISTTKYNIITFLPKALYEQFRRVANVYFLVAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDWRRFRQDVKVNHRKASVHKGNGVFDLKQWQDIVVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFIGIIRCEDPNPSLYTFIGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVVFTGHESKVMQNSTKSPSKRSRIERKMDYIIYLLFTVLILISLVSSVIFAAITRFQTINWWYLMPMQSEVQYDPNNAALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHEETGTPASARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGVSSSEVELATAQQMALELEEDQQDGLSKTPTHEGKASVSWENVDLETVVTSTDDEAQKATIKGFRFEDGRLMNCNWLKEPNPDVLLLFFRILAVCHTAIPELNEETGTLTYEAESPDEGXFLAASREFGFEFCKRTQASVFIREKLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMAKGLTGYIIFDRLSKNGKTYLEATTKHLNEYGENGLRTLALAYRKLDEEEYNAWNNEFQKAKTTVGPDREAVLEELAERMEKELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRHGMKQICISIQEADLVTNFDKEAIKEGILNQIINASQMIKLETDPHAAFALIIDGKALAYTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFAIAQFRFLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFESMTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNVFFDWFRILGWMLNGLFCSLVVFLFNICIFSDQAFRGDGRTSDMAVVGTTMFTCIIWAVNCQIALTICHFTWMQYIFIIGSIAFWYIFLVLYGMLSPNYSKTAYQILLEVLSPAPMYWLVTFLVTVTCNFPYYAHVCFQRWKSPLDHHIIREIKHYKKDVEDQRMWKRERSKARQKTNIGFSARVEAKMRNLKHKLHRKQSALPFMSSPDGHYK 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2175 1226 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Prci12g2175 1226 Gene3D - 420 432 IPR023214 -
Prci12g2175 1226 NCBIfam HAD-IC family P-type ATPase 850 957 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g2175 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Prci12g2175 1226 Gene3D - 433 457 IPR023299 GO:0000166
Prci12g2175 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1154 IPR023298 -
Prci12g2175 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 906 1154 IPR032630 -
Prci12g2175 1226 SFLD Haloacid Dehalogenase 406 929 - -
Prci12g2175 1226 Coils Coil 449 469 - -
Prci12g2175 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1180 - -
Prci12g2175 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 684 IPR023299 GO:0000166
Prci12g2175 1226 FunFam Phospholipid-transporting ATPase 587 719 - -
Prci12g2175 1226 Gene3D - 717 918 IPR023214 -
Prci12g2175 1226 NCBIfam phospholipid-translocating P-type ATPase 58 1164 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci12g2175 1226 Gene3D - 586 698 IPR023299 GO:0000166
Prci12g2175 1226 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Prci12g2175 1226 PRINTS P-type cation-transporting ATPase superfamily signature 878 897 - -
Prci12g2175 1226 CDD P-type_ATPase_APLT_Dnf-like 60 1037 - -
Prci12g2175 1226 SUPERFAMILY HAD-like 411 922 IPR036412 -
Prci12g2175 1226 FunFam Phospholipid-transporting ATPase 721 918 - -
Prci12g2175 1226 Pfam Cation transport ATPase (P-type) 592 641 - -
Prci12g2175 1226 Gene3D - 118 289 - -
Prci12g2175 1226 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Prci12g2175 1226 FunFam Phospholipid-transporting ATPase 119 289 - -
Prci12g2175 1226 SFLD p-type atpase 406 929 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2175 Prci-Chr12 39205501 39212198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2175 1 1222 Primary Pumps ATPases AT1G17500 70.213 0.0 1813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2175 K01530 - gmx:100819559 1905.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0631 13 5052080 5059586 Prci12g2175 12 39205501 39212198 CCT