Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci12g2175 | ATGGGACTACGTAAATTAAGAGCGAAGATTAAAAGGAGCCATCTTTACACGTTTGCTTGTCTTAGGCGGAGTCACACTGCACATGAGAATGGTCAGAACCTTGAAGGTCCTGGTTTTTCAAGAGTTGTACACTGCAACCACCCTCATCTCCATGAAAAGAAGCCTCACTTTTACTGCCGGAATGATATATCAACTACAAAATACAATATTATAACCTTTTTACCTAAGGCACTCTATGAGCAATTTCGCCGGGTTGCTAATGTATACTTCCTTGTGGCTGCATGCCTTTCTGCCTCTCCAATTTCACCATTCTCTCCGCTGAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTGGCGCAGGTTTCGTCAGGATGTCAAAGTTAATCACCGGAAAGCTAGTGTCCATAAAGGCAATGGTGTTTTTGATCTCAAGCAATGGCAGGACATTGTGGTTGGGGATGTAGTAAAAGTAGATAAAGATCAATTTTTTCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTAAAGGTAAAAAGATCTTTGGAGGTTACCATGCTTCTATATAATGATGAATCTTTTAAGGATTTCATTGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTATCGGAAATTTTGAGTATGAACGTGAGGTTCATCCGATTGAGCCCAGTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAACACTGATTTCATATATGGAGTTGTCGTTTTCACTGGTCATGAAAGTAAAGTTATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGCAGAATAGAGAGAAAGATGGATTACATCATATACCTTCTATTTACTGTTCTTATTTTGATATCCTTGGTCAGTTCAGTAATATTTGCCGCAATCACTAGATTTCAAACTATAAATTGGTGGTATTTGATGCCCATGCAATCGGAGGTCCAATATGATCCCAATAATGCTGCATTGGCTGGGTTAAGTCATCTGGTTACCGCACTCATTCTTTATGGATATTTGATACCCATATCACTTTACGTTTCAATTGAGGTTGTGAAGGTTTTACAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCATGAAGAAACTGGGACCCCAGCTAGTGCTCGAACATCAAATCTGAATGAAGAGTTGGGTCAAGTGGACACCATACTTTCTGACAAGACTGGAACTTTAACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGCTGCATATGGTGTGAGTTCCAGTGAAGTTGAGCTTGCTACAGCACAGCAGATGGCTCTTGAACTTGAGGAAGACCAGCAGGATGGTCTCTCCAAAACACCCACACATGAGGGCAAGGCATCTGTTTCGTGGGAAAACGTTGACCTGGAGACTGTTGTTACTTCCACGGATGATGAGGCTCAGAAGGCTACTATAAAGGGTTTCAGATTTGAGGATGGTCGTCTCATGAACTGTAACTGGTTGAAAGAGCCCAATCCTGATGTCCTTTTATTGTTTTTCCGAATATTAGCTGTTTGCCACACTGCCATTCCTGAGCTGAATGAGGAGACAGGAACTTTAACTTATGAGGCTGAATCCCCTGATGAAGGCTTTCTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGTAAAAGAACTCAAGCAAGTGTTTTCATCCGTGAAAAGCTTTCACCTTCTGAACAAGCTGTTGAAAGGGAGTACAAAATCCTGAATCTGTTGGACTTTACTAGCAAAAGAAAACGAATGACAGTGATTGTGCGCGATGAGGAGGGAAGTTTACTTCTTATGGCAAAGGGGCTGACAGGTTATATCATATTTGATCGACTATCAAAGAATGGAAAGACGTATTTAGAGGCTACAACCAAACATTTGAATGAATACGGAGAAAATGGTTTGAGAACATTGGCTCTAGCTTACAGAAAGCTTGATGAGGAAGAGTACAATGCTTGGAACAATGAGTTTCAGAAAGCCAAAACGACTGTTGGGCCTGACAGAGAGGCAGTGCTTGAGGAATTAGCTGAAAGAATGGAAAAAGAGCTAATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTTCCCCAATGCATTGACAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATAGGTTTTTCTTGTAGTTTGCTTCGACACGGCATGAAGCAGATCTGCATATCTATTCAAGAGGCAGACTTAGTTACCAATTTTGACAAAGAGGCCATTAAGGAGGGCATTTTGAATCAAATCATCAATGCCTCACAAATGATAAAGCTGGAGACAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTAGCATATACTTTAGAAGATGATATGAAGCATCAATTTTTGGGATTGGCTGTTGATTGTGCTTCTGTCATCTGCTGCCGTGTGTCTCCCAAGCAAAAGGCGTTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATTGGTATTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCGCTATTGCCCAATTTAGATTTTTGGAACGACTTTTGGTGATCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGGCTCACCATCTTTTATTTTGAGTCCATGACGAGCTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTAACATCATTACCTGTCATTTCGCTTGGAGTATTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCTCTATACCAGCAAGGCCCTAGAAATGTGTTTTTTGACTGGTTTAGAATATTGGGATGGATGCTCAATGGTCTATTTTGCTCCCTCGTTGTCTTCTTATTCAACATCTGCATTTTCTCTGACCAAGCGTTTCGAGGGGATGGCCGGACCTCTGATATGGCTGTTGTTGGTACCACGATGTTCACTTGCATAATATGGGCTGTCAACTGCCAGATTGCCCTCACAATTTGCCATTTCACATGGATGCAATACATATTTATCATAGGCAGTATAGCCTTTTGGTACATATTCCTGGTGCTATATGGCATGCTTTCACCAAATTATTCAAAAACTGCCTACCAAATCCTGCTTGAAGTTCTTTCTCCTGCCCCAATGTATTGGTTGGTGACTTTTCTAGTAACAGTTACTTGCAATTTTCCTTATTATGCCCATGTATGCTTTCAAAGATGGAAAAGTCCTTTGGATCATCACATTATCAGAGAGATCAAGCACTACAAGAAGGACGTAGAGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCAAGACAGAAAACCAATATTGGGTTCAGTGCAAGAGTGGAAGCTAAGATGAGGAATTTGAAGCATAAGCTGCATAGGAAGCAATCAGCCTTGCCTTTCATGTCTTCTCCAGACGGACATTACAAATGA | 3678 | 0.4097 | MGLRKLRAKIKRSHLYTFACLRRSHTAHENGQNLEGPGFSRVVHCNHPHLHEKKPHFYCRNDISTTKYNIITFLPKALYEQFRRVANVYFLVAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDWRRFRQDVKVNHRKASVHKGNGVFDLKQWQDIVVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFIGIIRCEDPNPSLYTFIGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVVFTGHESKVMQNSTKSPSKRSRIERKMDYIIYLLFTVLILISLVSSVIFAAITRFQTINWWYLMPMQSEVQYDPNNAALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHEETGTPASARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGVSSSEVELATAQQMALELEEDQQDGLSKTPTHEGKASVSWENVDLETVVTSTDDEAQKATIKGFRFEDGRLMNCNWLKEPNPDVLLLFFRILAVCHTAIPELNEETGTLTYEAESPDEGXFLAASREFGFEFCKRTQASVFIREKLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMAKGLTGYIIFDRLSKNGKTYLEATTKHLNEYGENGLRTLALAYRKLDEEEYNAWNNEFQKAKTTVGPDREAVLEELAERMEKELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRHGMKQICISIQEADLVTNFDKEAIKEGILNQIINASQMIKLETDPHAAFALIIDGKALAYTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFAIAQFRFLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFESMTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNVFFDWFRILGWMLNGLFCSLVVFLFNICIFSDQAFRGDGRTSDMAVVGTTMFTCIIWAVNCQIALTICHFTWMQYIFIIGSIAFWYIFLVLYGMLSPNYSKTAYQILLEVLSPAPMYWLVTFLVTVTCNFPYYAHVCFQRWKSPLDHHIIREIKHYKKDVEDQRMWKRERSKARQKTNIGFSARVEAKMRNLKHKLHRKQSALPFMSSPDGHYK | 1226 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci12g2175 | 1226 | Pfam | Phospholipid-translocating ATPase N-terminal | 43 | 110 | IPR032631 | - | |
| Prci12g2175 | 1226 | Gene3D | - | 420 | 432 | IPR023214 | - | |
| Prci12g2175 | 1226 | NCBIfam | HAD-IC family P-type ATPase | 850 | 957 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Prci12g2175 | 1226 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 425 | 431 | IPR018303 | - | |
| Prci12g2175 | 1226 | Gene3D | - | 433 | 457 | IPR023299 | GO:0000166 | |
| Prci12g2175 | 1226 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 55 | 1154 | IPR023298 | - | |
| Prci12g2175 | 1226 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 906 | 1154 | IPR032630 | - | |
| Prci12g2175 | 1226 | SFLD | Haloacid Dehalogenase | 406 | 929 | - | - | |
| Prci12g2175 | 1226 | Coils | Coil | 449 | 469 | - | - | |
| Prci12g2175 | 1226 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 32 | 1180 | - | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci12g2175 | K01530 | - | gmx:100819559 | 1905.95 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Prci13g0631 | 13 | 5052080 | 5059586 | Prci12g2175 | 12 | 39205501 | 39212198 | CCT |
Showing 1 to 1 of 1 entries