Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2172 ATGAAATATATGAAGCCCAACCTGAGCTATCACAAATCTGTTGAGCTTTTCAACCTCAGAGCCTTTCACTCACACCATCCACAAATTGGATATGAATCCCACTCACAAAGGGTTGTTGATTATGCAAAAGGCATCCCATTAGTTTTGGTAGCATTGGGTGCATTTCTTCATTCCAAAACTACAAAGGAATGGGATAGTGCATTGACAAAACTCAAAAAGAGTCCCAATGAAGACATTCTTGAAGTGTTCAGATTGAGCTATGATGCATTAAATGATGAAGAAAAGGAAATGTTTCTTGATATAGCTTTCTTTTTGAAGGGTGAAATCGAAGAACATGTGATAACTCTATTAGAGAACTTTGGCTACCATGCTAGAATTGGATTAAAAACCCTTGTCGATAGCACTCTCATAAATCTAGATGGTGTCACGGTCCGCATGCATGATTTAATACAAGAAATGGGCTACGAAATTGTTCGTCAGGAGTGTACTAAAGAACCTGAAAGACGAAGTAGATTATGTGATTTAAAAGAAGTCTATCACGTGTTAAAAAATAATAAGGGAACTGATGCAATTGAAGGCATAGTATTAGATTTGTCTAAAATTAGACATTTACACTTAAGCACCGATACCTTCAAAAAGATGCCTAATCTAAGATTCCTAAAATTCTATTCCCCTACGGATAGGAGATCTTGTAAGGTGGACCTTTCTTTTGGCCTTGAATCATTACCTGAGCAATTAAGGTACCTTCAATGGGATGATTATCCTTTGGAGTCTTTGCCATCATCATTTTGTCCTGAGAAACTTGTTGAACTTCGCATGGTAAATAGCCATGTTAAAAAACTTTGGGATGGAGTACAGGATTTTGTGAACTTAAAGAGGATAAACCTTGTTGGGTGTAAGCAATTGACAGAGCTACCTGATTTTTCAAAGGCACAGAATCTCGAATCAATGTATCTCACATCTTGTGAAAGTCTGTGTTATGTTCACCCATCTATCTTATGTTTACAAAGGCTTGTCATTTTGGGTCTCGATAAATGCATTAAAGTGAAGAAACTTCATGGGGAGAATCCTCTAAAATCTCTCAAAGAAATCTATCTCAATTGGTGCTTTAGTTTGACAGAATTTTCTTTGTCATCAGAAGAAATGGCAAGATTAGAACTAGAAACTACACGCATTGAGATATTAGACTCATCAATTGGGCATCTCAGTAAACTTAGACAGTTTAGTCTCAATGGTTCAAGACTGAAAAGTCTTCCAATAAACGAGCTATGCTGTTTAAGATCTCTAGAGGAGCTATGCCTTTATAATTGTGAACAAGTAATTGACAAAATGAAGTTGCATGATCTGTTTGATGCCCTGCGGTTTTTACAAAAATTATGTTTGGATGGGTGTCGAAACTTAACTGAGCTACCTGACAATATCAAGCATCTTTTGGGGCTAAAAGTTCTTTCTTTGAAGAATTGTGAGAGGCTACAATCTCTACCAGAGCTTCCACCATCCATTGAAGAAATAGATGCTACCAATTGTTCATCATTAGAGACACTAGTCCTCACTTCTCAGATGGGATCTTCACTGTTGCCAGAGGAAGGGATGATGGCTTTAATACCCTATTCCTCAACTGGGTATCTTACAAAACTGAGAAAGCTTCGCCTCAATGTCTCAAGTCTGAAGAATTTTTCAATTGAGCAGCTATGTTGCTTGAGATCTCTCAAGGAGCTCTCTCTCTTTGATTGCGGGGAAGTGATTGACAAGTCAAAGTTGCGCATGCTTTTTGATGCCTTATCCTCTTTGGTAGACCTTTATTTGAAAGGTTGTAGTAACTTGAATGAACTTCCCGACAACTTCAGCACCTTGTCATCGTTATATGTACTGGGATTGGACGGAAGCAATGTAGAGTACTTGCCTTCTAGCATCAAGTATCTTTGGAAGCTAGACTACATTTACCTGACCAATTGTAGGACACTCCGGTCTCTACCAGAACTTCCTCCATTCACTAAATATGTAAAAGCCACTAATTGCTCATCATTGGAGGTTGCCTTCCCTTTAACAGCTTCTAGACCACGAAGGAAATATCTGGTGGAGTCCCTCTTTTTTGAGAATTGCTTGAAGTTGGAGGAGCTTTCACTTTCTTGTATTGAGGAATATGCTAATTTATCATTGAAGCGAGTGGCATATCTCAATCGAATTGGTGCTTTTTGTTACCCAGGAAGCAAAATTCCTGAGGCTGAGTGGTTTAGATATGATCAGACAACCAAGGCTTCGAGTTTCGTAACCATTGAACTTACTTCAGCAGTGAACAACTTGATAGGCTTTGTTTTTTGCTCGGTTCTTTCTCCGTTCATGTCAAAGTCAAATTGTCAGAGTTACTTGAAATGCCAAATATATTTTGAAGATGGTGAACAAGTCAAAGGCAAAGGTGATGATATGCGGATAGCAAAATTAAATTCGCATCATGTGTTTATGTGGTATGATCCAATCTACTCTGTTGGTATTTTGAATGAACTTATAGAAAGAGAGGACGATCAAGGCAGCAAGGCCAACCCGAAGCTTTCATTTGAATTTTCTGCAGTCACTTATGATGAGAATTACAAGATAACCAAACATGATGGGTTGATAGAAGCATGTGGAGTGTGTCCAATATATGCTTCAGAATATCACAATTTCCTTCAACAAATAGAACTCGGGTCAAACATGGGTGGCCAAAAAGTTGGTGGTCATGGTAATAATGATGAGCATGCACTTTGTGGGATTATGGAATATGCTAGTCTTTCCTCAAAGAAGGCAATTTATGACAATTTTGAAAGAAGCGTTGTTTCTTTCCCCAAACCCACAATTCCGAAGTGGTTTATTAATCGCAGTTCATCACCATCTTCTTCCATATTTGTTTCCGTCATTCCAGATTTTGACGGCTTATTGGGTTTCATTTTCTGTTTTTTTATTCCCCAATTTTCATCAAAAGAGAAGGATTGGAGTCACTCGGGATGCCGATGCCGTTGGGGAGAAACTATTAATGAGGAAGAAGGAACAATTTTGGATCGAGGTTTTGAAGGCCCAAGAGGATGGCATTATTCTATGATAGAATTGAACTCAGATAATGTTTTCCTATGGTATGATCCCCTCTTCTGTGAATTGATAATAGAGGGAGTTAGAAGAAAAAGAGGCAATGATGAGGGAACCGGTAATTATAATCCAAGGCTTTCATTTCAATTTGAGTTTGGTGATGGTTTGATCAAAGAATGTGGAGTCCGCCCATATACGCCTCAGAATATAACGATTTCCTTCAACTGA 3288 0.3832 MKYMKPNLSYHKSVELFNLRAFHSHHPQIGYESHSQRVVDYAKGIPLVLVALGAFLHSKTTKEWDSALTKLKKSPNEDILEVFRLSYDALNDEEKEMFLDIAFFLKGEIEEHVITLLENFGYHARIGLKTLVDSTLINLDGVTVRMHDLIQEMGYEIVRQECTKEPERRSRLCDLKEVYHVLKNNKGTDAIEGIVLDLSKIRHLHLSTDTFKKMPNLRFLKFYSPTDRRSCKVDLSFGLESLPEQLRYLQWDDYPLESLPSSFCPEKLVELRMVNSHVKKLWDGVQDFVNLKRINLVGCKQLTELPDFSKAQNLESMYLTSCESLCYVHPSILCLQRLVILGLDKCIKVKKLHGENPLKSLKEIYLNWCFSLTEFSLSSEEMARLELETTRIEILDSSIGHLSKLRQFSLNGSRLKSLPINELCCLRSLEELCLYNCEQVIDKMKLHDLFDALRFLQKLCLDGCRNLTELPDNIKHLLGLKVLSLKNCERLQSLPELPPSIEEIDATNCSSLETLVLTSQMGSSLLPEEGMMALIPYSSTGYLTKLRKLRLNVSSLKNFSIEQLCCLRSLKELSLFDCGEVIDKSKLRMLFDALSSLVDLYLKGCSNLNELPDNFSTLSSLYVLGLDGSNVEYLPSSIKYLWKLDYIYLTNCRTLRSLPELPPFTKYVKATNCSSLEVAFPLTASRPRRKYLVESLFFENCLKLEELSLSCIEEYANLSLKRVAYLNRIGAFCYPGSKIPEAEWFRYDQTTKASSFVTIELTSAVNNLIGFVFCSVLSPFMSKSNCQSYLKCQIYFEDGEQVKGKGDDMRIAKLNSHHVFMWYDPIYSVGILNELIEREDDQGSKANPKLSFEFSAVTYDENYKITKHDGLIEACGVCPIYASEYHNFLQQIELGSNMGGQKVGGHGNNDEHALCGIMEYASLSSKKAIYDNFERSVVSFPKPTIPKWFINRSSSPSSSIFVSVIPDFDGLLGFIFCFFIPQFSSKEKDWSHSGCRCRWGETINEEEGTILDRGFEGPRGWHYSMIELNSDNVFLWYDPLFCELIIEGVRRKRGNDEGTGNYNPRLSFQFEFGDGLIKECGVRPYTPQNITISFN 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2172 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 101 IPR027417 -
Prci12g2172 1095 Gene3D Ribonuclease Inhibitor 505 788 IPR032675 -
Prci12g2172 1095 Gene3D - 7 91 IPR042197 -
Prci12g2172 1095 Pfam Leucine Rich Repeat 267 286 IPR011713 -
Prci12g2172 1095 Pfam C-JID domain 734 884 IPR045344 -
Prci12g2172 1095 Gene3D Ribonuclease Inhibitor 357 504 IPR032675 -
Prci12g2172 1095 Gene3D Ribonuclease Inhibitor 158 356 IPR032675 -
Prci12g2172 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 365 511 IPR044974 GO:0006952
Prci12g2172 1095 SUPERFAMILY L domain-like 449 710 - -
Prci12g2172 1095 SUPERFAMILY L domain-like 145 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2172 Prci-Chr12 39189496 39198084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2172 348 653 WRKY Transcription Factor Family AT4G12020 27.419 4.82e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2172 - - pcin:129287780 2196.78