Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2171 ATGGGTGCTGCAGCTTCATCCTCCTCTTCTTGTGCATTTTTTCCCAAGAAATACGATGTGTTTCTGAGTTTCAGAGGTGAGGACACTCGTAAAACCTTCACCAGCCATCTCCACACAGCCCTATGCCAAAGAGGAATTCGAACATACATCGATTATGAGCTCCCAAAAGGCGATGACATTTCCCAAGCACTCATCCGAGCGATTGAAGACTCAAGCATATCTTTGGTGATCTTCTCTGAAAACTATGCTTCCTCAAAATGGTGTTTGAATGAACTCGTGAAGATACTTGAGTGTAAAGAGATCCAAGGACAGCTTGTTATTCCTATTTTCTACCAAGTAGACCCATCTCATGTTCGCAATCAAACGGGAACTTATCAGGAGGCATTTGCAAATCATTCTACGCAAAACCCATCAGAGAAGGTGAACAAGTGGAAACGTGCTCTTTTTGAAACTGCAAGCTCTGCTGGCTGGGACTCTCGGATCTGTAGGGACGAATCACAACTGATTCGTAATATTGTCAATGACATTTTGGACAGACTGAACCGCATGTATCCAATAAGTACATCACATGGTCTTGTTGGAATTGAGGAGAATGTTGATTGTATTAAATCGTTATTGGAACATGTCTCAATAGTTGGAATTTGGGGCATGGGCGGTATAGGTAAAACAACTATGGCCAAAGTTGTATTCAGCAATCTCTCCTCCCAATTTGAAAGCTGCTGTTTTTTTGAAAATCTAAGAGAAGAATCAGAAAAATATGGACTAAAGTATATACGTGATAAACTTCTCAAAGAACTATTGAAGGAAGAAGAGTCCATGGTTGGGTTCACATTTGCCATGAGAAGACTTGGTTGTAAAAAGGTTCTTATTGTGCTTGATGATGTCAATAGTGCAAATCAGTTAGAATATTTGGCCAAAGAATGTCATTCCTTGAGACTTGGCAGCAAGGTCATCATAACGACAAGAGATAAACATTTGCTTCTTGGAAGAGTTAATGAAATATACGAAGCTAAGCCATTGAGCTCTGATAAATCGGTTAACCTTTTCAACCTCAAAGCCTTTCACAATGATAATTATGACAGTGGATATGAAGAACTATCCGAGAGAGCTGTTTCTTATGCCAAAGGTAATCCTTTAGCTTTGATCACCTTGGGTTCATATCTGCATTCCAAAACTGCAGAGGAATGGGAAAGCGCATTGGCAAAATTAGAGAAGACTACCCATGAAGATATTCATGCAGTGTTAAAATTGAGCTATGATGGACTAGACCATGAAGAAAGAGAAATGCTTTTAGAAATTGCTTGCTTTCTAAAAGGTAAAAGTGTAGATCAAGTCGTAGCTCTTTTAGACAGCTATGGCTACCATGCAAGAATTGGCTTGAGGACCCTTGTAGATAAGGCTCTCGTACGTATTCCTTATTATTATGTGGAGATGCATGATTTAATACAACAAATGGGTCGGGAAATTGTTCGTCAAGAGTGTATTAAAGATCCTGGAAGACGAAGTCGACTGTGGAATCCTGATGAAATCTATGATGTATTGAAAAATAATCGGGTAACTGATGCAATTGAAGGCATAAGTTTTGATTTGTCTCAAATTGGAGATATGTGCTTACCTTCTCACACCTTTGAAAAGATGACTCATTTGAGATTTCTCAAATTCTATTCATCTAATCCAGATAGGAGAGCATGTGTGAATGTTCCCTCAAGTCTAGAGTCATTTTCCAATGCATTACGATATCTTCACTGGGACAATTTTCCTTCTGAGGCTCTACCACCATCTTTTTCTGCAGAGAAGCTCGTTGAACTTAGTTTGAATGGCAGTCGGCTTAAAAAATTGTGGGATGGAATGCAGGATTTGGTAAATCTAAGGGGATTAGACCTTGGCGGATCTAAACAATTGGTAGAGCTGCCTGATTTCTCCAGGGCACAAAATCTTGAACGGGTGAATCTCACTTCATGTGAAAGTTTATACCATCTTCATCCATCTATTTTATCTCTCAAGAGACTGAAGTCTTTGGCGCTTGAGAATTGCATAAACCTGAAGGATTTACAAGGTGAGAGTCATTTGAAATCTCTAGAGAGCCTCAATGTTGGTAATTGCTATTTCAAGGAATTTTCACTATCATCAGAGAGCATGAGAGTTTTACACTTAGATAGAACAGGCATTGAGTTATTAGGCTCATCAATTGGGCATCTCGGGAAACTTACCAGTCTCTCTCTCAATTGCTTAAGACTAAAGAATATTCCAGTAAGTGAGTTTTATGGATTGAGGTCTCTCAAGGATCTTTCTCTTTATGATTGCGGAGAGGTAATTGATGAATCAAAGTTACATATCTTGTTTGATGCTTTGCGATCCCTGATAAGTATTCATTTGGATGGGAGTTGCACTTTAACTGAACTCCCCAACAATATCAAGCATCTATCAAGACTAGAATTTCTTTCCCTGGAGAATTGCAAGGGCCTTCTATCTTTACCCGAGCTCCCACCATCCATCAAAGAGTTAGATTCCACCAACTGCACATCATTAAGGACATTGATACTCACTTCTAATACGGAATTTCCATTGTTGCCACAGCAAATATTAACACCCTATTCCTCAATCAGCGTGGGGTGCATACAAATCAAATGGTTGATATCTGCTACCCAGGGAGAGAAGTTCCAGATTGTTTGA 2673 0.3943 MGAAASSSSSCAFFPKKYDVFLSFRGEDTRKTFTSHLHTALCQRGIRTYIDYELPKGDDISQALIRAIEDSSISLVIFSENYASSKWCLNELVKILECKEIQGQLVIPIFYQVDPSHVRNQTGTYQEAFANHSTQNPSEKVNKWKRALFETASSAGWDSRICRDESQLIRNIVNDILDRLNRMYPISTSHGLVGIEENVDCIKSLLEHVSIVGIWGMGGIGKTTMAKVVFSNLSSQFESCCFFENLREESEKYGLKYIRDKLLKELLKEEESMVGFTFAMRRLGCKKVLIVLDDVNSANQLEYLAKECHSLRLGSKVIITTRDKHLLLGRVNEIYEAKPLSSDKSVNLFNLKAFHNDNYDSGYEELSERAVSYAKGNPLALITLGSYLHSKTAEEWESALAKLEKTTHEDIHAVLKLSYDGLDHEEREMLLEIACFLKGKSVDQVVALLDSYGYHARIGLRTLVDKALVRIPYYYVEMHDLIQQMGREIVRQECIKDPGRRSRLWNPDEIYDVLKNNRVTDAIEGISFDLSQIGDMCLPSHTFEKMTHLRFLKFYSSNPDRRACVNVPSSLESFSNALRYLHWDNFPSEALPPSFSAEKLVELSLNGSRLKKLWDGMQDLVNLRGLDLGGSKQLVELPDFSRAQNLERVNLTSCESLYHLHPSILSLKRLKSLALENCINLKDLQGESHLKSLESLNVGNCYFKEFSLSSESMRVLHLDRTGIELLGSSIGHLGKLTSLSLNCLRLKNIPVSEFYGLRSLKDLSLYDCGEVIDESKLHILFDALRSLISIHLDGSCTLTELPNNIKHLSRLEFLSLENCKGLLSLPELPPSIKELDSTNCTSLRTLILTSNTEFPLLPQQILTPYSSISVGCIQIKWLISATQGEKFQIV 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2171 890 Gene3D - 15 177 IPR035897 -
Prci12g2171 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 431 IPR027417 -
Prci12g2171 890 Pfam TIR domain 17 194 IPR000157 GO:0007165
Prci12g2171 890 Pfam NB-ARC domain 208 419 IPR002182 GO:0043531
Prci12g2171 890 SUPERFAMILY L domain-like 478 858 - -
Prci12g2171 890 PRINTS Disease resistance protein signature 806 822 - -
Prci12g2171 890 PRINTS Disease resistance protein signature 374 388 - -
Prci12g2171 890 PRINTS Disease resistance protein signature 282 296 - -
Prci12g2171 890 PRINTS Disease resistance protein signature 211 226 - -
Prci12g2171 890 Gene3D - 339 423 IPR042197 -
Prci12g2171 890 Gene3D Ribonuclease Inhibitor 513 708 IPR032675 -
Prci12g2171 890 SMART till_3 17 154 IPR000157 GO:0007165
Prci12g2171 890 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Prci12g2171 890 Gene3D Ribonuclease Inhibitor 709 887 IPR032675 -
Prci12g2171 890 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Prci12g2171 890 Gene3D - 178 332 IPR027417 -
Prci12g2171 890 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Prci12g2171 890 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 750 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2171 Prci-Chr12 39166715 39170951 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2171 16 814 WRKY Transcription Factor Family AT4G12020 33.818 9.99e-109 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2171 - - pcin:129287787 1763.81