Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2170 ATGGCTTTTGGTACTGCTTCTTCATCCTCGTCCTCACTTCCTCCCAAGAAACATGATGTGTTTTTGAGTTTCAGAGGCGAGGATACTCGTAGAACCTTCGCCAGCCATCTCTATGCTGCCTTACGCCAGAGAGGAATTCGGACCTACATAGATTATGAGCTCCCAAAAGGCAATGACATCTCGGACGCACTGATCCAAGCAATTCAGGATTCAGGTATAGCTGTGGTGATCTTCTCTGAGAACTATGCCTCCTCCAAATGGTGTTTGAACGAACTCGTCCAGATCCTTTGGTGTGGAGAGGTCCAAGGACAGCTTGTTATTCCTGTCTTCTATCAAATTGACCCATCTCATGTACGCAATTATCAAAAGGGAATTTACATGGAGGCATTTACAAAACACGAGAGAGACTTGAAGCTTAATCAATACCAAGTGAACAAGTGGAAACAAGCTCTTTCTATCACTGCAAATTTGGCTGGCTGGGATTCTCGAGCCTGTAGGGATGAATCAGAGCTCATTCAAAATATTATCAGCCATGTTATGCAAAACATTAGTGTCAGGTGTCCAAGTTCACTGGCAGTAGTGGGTCTTGTTGGAATTGATGAAAATTGTGCCAAGATAGAAAGGTTATTGGAGAAAGATCCAAAAATTGGAATTTGGGGGATGGGCGGCATAGGCAAAACAACCATGGCTAGGGCTTTATTTTCCAAACTCTCCTCCCAATTTGAGAGGAGTTGTTTTTTGGAGAATTTAAGAGAAAATGTGAAAAAGTGTGGATTGACATATTTACATGATAAACTTTTCTCTGAGCTTTGGAAGCAAGAAAGTTCCTATAATAGGCCACTGTATGTTGATGAAGGTTCTTACGTCATGCACATACTAAGTCGTAATAAAGTTTTCATGGTGCTTGATGATATTAGCAATAGGAAGCAATTAGAGTATTTAGCTCCGTATTGTAATTACTTGGAACCTGGTAGTAAAATCATCATTACAACAAGGCATAAGCAATTGCTTAACATTGCAGGAGTTAAAATATATGAGGCCCAGCCTTTAAGTGATCACAAGTCTATAGAGCTTTTCAATCTCAAAGCCTTCAACACATACCATCCAAAAATTGGATATGAATTCCTGTCAAAAAGGGTTGTTGATTATGCAAAAGGAATCCCATTAGTTTTAGTAGTTTTGGCTTCATTTCTTTCTTTAAAAACTCCAAAGGAATGGGATAATGCATTGTCAAAACTAAAGAAGGGTCCCCATGAAGAAATTCTAGAAGTGTTGAAATTGAGCTTTGATGGGTTAGATTATGAAGAGAAGGAAATGTTTTTAGATATTGCATGCTTCTTGAAAGATGAACACAAGGAACATGTAATAGCACTATTTGAGAGCTATGGCTTTGATGCAACAATTGGCTTGACAGCCCTTGAGGATAAAGCACTTGTAAATATTGATAACAATATGCGGGTGCAAATGCATGATTTGATTCAAGCCATGGGTTGGAAAATTGTTCGTCAAGAGTGTATGGAAGATCCTGGAAGACGTAGTCGATTATGGAATCCTTATGAGATCTATGACGTATTAAAATATAATCGGGGAACTAATGCTATTAAAGGCATAATTGTAAATTTATCTCAAGTTCGAGATATGCATTTGAGTGCCAATACTTTTAAAAAAATGACTAATTTAAGGTTTCTCAAGCTCTATTCACCTACATCTAGAGGTGAAAGTTCGTGTATTATTGATAAAGGACCTAACTTATTCCCCAGTTCATTGAGGTATCTTCGATGGGACAATTTTCTTATGAAGTCTCTCCCATTGTCATTTTGTGTTGAGAAGCTTGTAGAGATTTGCATGCCTGGTAGCCGACTTGAAAAATTGTGGGATGGAGTGCAGGACCTGGTGAACCTGAGGAAGATAGATTTCAGTGGATCCAAACAATTGATTGAGTTGCCAGATTTCTCCAAGGCAAAAAATCTTGAAGTTGCGGATCTCTCATTATGTGAAAGTTTATGTCATCTCCATCCGTCTATTTGGACTCTCAGAAACTTTACTGGTTGA 2052 0.3879 MAFGTASSSSSSLPPKKHDVFLSFRGEDTRRTFASHLYAALRQRGIRTYIDYELPKGNDISDALIQAIQDSGIAVVIFSENYASSKWCLNELVQILWCGEVQGQLVIPVFYQIDPSHVRNYQKGIYMEAFTKHERDLKLNQYQVNKWKQALSITANLAGWDSRACRDESELIQNIISHVMQNISVRCPSSLAVVGLVGIDENCAKIERLLEKDPKIGIWGMGGIGKTTMARALFSKLSSQFERSCFLENLRENVKKCGLTYLHDKLFSELWKQESSYNRPLYVDEGSYVMHILSRNKVFMVLDDISNRKQLEYLAPYCNYLEPGSKIIITTRHKQLLNIAGVKIYEAQPLSDHKSIELFNLKAFNTYHPKIGYEFLSKRVVDYAKGIPLVLVVLASFLSLKTPKEWDNALSKLKKGPHEEILEVLKLSFDGLDYEEKEMFLDIACFLKDEHKEHVIALFESYGFDATIGLTALEDKALVNIDNNMRVQMHDLIQAMGWKIVRQECMEDPGRRSRLWNPYEIYDVLKYNRGTNAIKGIIVNLSQVRDMHLSANTFKKMTNLRFLKLYSPTSRGESSCIIDKGPNLFPSSLRYLRWDNFLMKSLPLSFCVEKLVEICMPGSRLEKLWDGVQDLVNLRKIDFSGSKQLIELPDFSKAKNLEVADLSLCESLCHLHPSIWTLRNFTG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2170 683 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Prci12g2170 683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 679 IPR044974 GO:0006952
Prci12g2170 683 SMART till_3 17 157 IPR000157 GO:0007165
Prci12g2170 683 SUPERFAMILY L domain-like 488 680 - -
Prci12g2170 683 Gene3D - 349 433 IPR042197 -
Prci12g2170 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 443 IPR027417 -
Prci12g2170 683 Gene3D Ribonuclease Inhibitor 524 682 IPR032675 -
Prci12g2170 683 Gene3D - 186 344 IPR027417 -
Prci12g2170 683 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Prci12g2170 683 PRINTS Disease resistance protein signature 215 230 - -
Prci12g2170 683 PRINTS Disease resistance protein signature 652 668 - -
Prci12g2170 683 PRINTS Disease resistance protein signature 384 398 - -
Prci12g2170 683 PRINTS Disease resistance protein signature 292 306 - -
Prci12g2170 683 Pfam NB-ARC domain 206 420 IPR002182 GO:0043531
Prci12g2170 683 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Prci12g2170 683 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Prci12g2170 683 Pfam TIR domain 17 182 IPR000157 GO:0007165
Prci12g2170 683 Gene3D - 15 185 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2170 Prci-Chr12 39128204 39145301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2170 16 665 WRKY Transcription Factor Family AT4G12020 31.437 1.26e-85 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2170 - - pcin:129288107 1363.59