Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2167 ATGATTTTGCGCTCTGAATTAGCTGATCACAGCATCATGGCCGCTGCTTCTTCATCCTCATCCTCCTCCTCCTCTTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTCAGTTTCAGAGGCGAGGACACTCGCAGAAGCTTCACCAGCCATCTCCATACTGCCCTGTGCCAAAGAGGAATTCGAACCTACATAGATTATGAGCTCCCAAAGGGCGATGACATCTCGGACGCACTCATCGGGGCAATTCAGGATTCAAGTATAGCTGTGGTGATCTTCTCTCAGAACTATGCCTCCTCGAAATGGTGTTTGAATGAGCTCCTCCAGATCCTTTGGTGTAGAGAGGTCCAAGGACAGCTTGTTATTCCTGTCTTCTATCAAGTTGACCCATCTCATGTACGCCATCAGAGGGGAACTTACAGGGAGGCGTTTGCAAAGCATGAGAGAGACTTCAGGCTTCATCAAGACCAAGTGAACAAGTGGAAACAAGCTCTCTTTCTAACTGCAAATTTAGCCGGCTATGATTCTCGAATCTGCAGGGATGAATCAGAACTCACTCAAAACATTGTCAACAACGTGCTGTGTAACGTTAACCTTACTTGTCCAAGCTCACCACTGACAGATCTTGTTGGAATTGATGAAAATTGTGCCGAGATCGAAAGGTTATTGGAAAAGGCCCCAATAATTGGAATTTGGGGTATGGGTGGCATAGGCAAAACCACCATGGCTAAAGCTTTATTCATCAAACTCTCCTCCAAATTTGAGGGTCGTTGCTTTTTGGAAAATTTAAGAGAAGATGTAGAAAAGCATGGATTGACACATGTTCGAGATAAACTTCTCTTTGAATTACTAGAAGAAGAAAGATCCTATCACAGGCCACCTAATGTTGCAGGAAGCGCCTTTATTAAGAGGAGACTGAGTTGTAAAAAAGTCTTTATAGTGCTTGATGATGTTAGTAGTTGGAGGCAATTAGAATATTTAGCTCCGTATTGTGATCATTTGGGACCTGGTAGTAAAGTTATTATTACAACTAGGGACAAGCAATTCCTTGTAATTGGAAAAGTCAATGAGATATATGAGGCCCAGCCTTTGAGCGGTCACAAATCTGCAGAGCTTCTCAACCTCAAAGCCTTTGATAAATACCATCCAAAAATTGGATATGAATTCCTCTCAAAAAGGGTTGTTGACTATGCAAAAGGCATTCCATTAGTTTTGGTAGTATTGGGTTCGTTTCTTCGTTCAAAATCTCCAAAGGAATGGGACAGTGCATTGTCAAAACTAAAGAAGAGCCCCAATGAAGACATTTTTGAAGTTCTGAAATTGAGCTTTAATGGATTAAATCATGAAGAGAAAGAAATGTTTCTAGATATTGCATTCTTTTTGAAGGGTGAAACTGAAGACTATGTAATAACGATATTAGAGAGCTATGACTTCCATGCTAGGATTGGGTTAAAAACCCTTGTAGATAGCACCCTTATAAGTGTTGAAGATGGCAATGTTTACATGCATAACTTAATCCAAGAAATGGCCTATGAGATTGTTCATCAAGAGTGCATCAAAGAACCCGGAAGACGAAGTCGATTACATGATCCAAAAGAAGTCTATTATGTGCTGAAAAATAATACAGGAACTGATGCAATCGAAGGCATAGTATTAGATCTGTCCAAACTTAGTCATTTAACCTTGAGCCCTGATACTTTCAAAAAGATGCCTAAACTAAGATTTCTAAAATTCTATTCACCAAAGGATAGGAGATCTTGTAAGGTGAACCTTTCTTCTGGCCTTGAATCATTATCTGAGCAATTGAGATACCTTCAGTGGGATGGTTATCCTTTGGAGTCCCTACCGTCCACATTTTGTCCTGAGAAACTCGTTGAACTTTGCATGCAAAACAGCCATATTAAAAAACTTTGGGATGGAGTACAGGATTTTGTGAACTTAAGGAGAATAAATCTTGCTAGATGCAAACAACTGATAGAGCTACCTGATTTTTCAAAGGCACATAATCTTGAATCGGTCAATCTCTCATCATGTGAAAGTTTGTGTTATGTTCATCCATCCATCTTAGCTCTACAAAGGCTTGTTACTTTGGATCTCAACAGATGTATTAAACTGAAGAATCTTCATAGTGAGATTCATTTGCAATCTCTCAGGCGGCTCTATGTCAGTTGGTGCTTTAGTTTGACAGAATTTTCATTGTCGTCCCATGAAATCGCAAGTCTAGAACTAGAAACTACACGAATTGAGATATTGGACTCGTCAATTGGGCATCTCAGTAATCTCAAACAATTCAGGCTTAATTGTTCAAGATTGAAGAATCTTCCAATAAATGAGTTATGTTGTTTAAGATCCCTGGAGGAGCTTGGGCTTTTTAATTGTGAACAAGCAATTGACAAGGTGAAGCTCCACATTCTGTTTGATGCCCTGCGATTGTTGGAAATATTATGTTTGGATGGGTGTCAAAAATTAACCGAGCTACCTGACAATATTAAGCATCTTTCAGGGCTAAAAGCTCTTTCTTTAAAGAATTGTGAGAGGCTACAATCTCTACCAGAGCTTCCACCATCTATTGAAGAATTAGATGCCACCAACTGCCCATCCTTAGAGGCACTAGTCCTCATTTCTGAGATGGAATCTTCAACGTCGCCAGAGGAAGGAATGATGGCTTTAACACCCTATTCCTCAACTGGGTATCTTTCAAAACTTAGAAAGCTTCGCCTCAATGTCTCAAGTCTGAAGAATTTTTCAATTGAGCAGCTATGTTGCTTGAGATCTCTCAAGGAGCTCTCTCTCTTTGATTGCGGGGAAGTGATTGACAAGTCAAAGTTGCGCATGCTTTTTGATGCCTTATCCTCTTTGGTGGACCTTTATTTGGAAGGATGTAGTGATTTGGATGAACTCCCTGACAACCTCAGCTCCTTATCTTTGTTATATTTATTAGGATTGGAAGGAAGCAATGTCAAATACTTGGCTTCTAGCATCAAGCATCTTCCAAGGCTAGACTACATTTACTTAACCAATTGTAGGACACTTCGATCTCTACCAGAACTTCCACCATTCACTAGATATGTAAAAGCCACTAATTGCTCATCACTGCAAGCTGTGTCCCTTTTAAAAAATCCTAGACAACGGCAAAAATATTTGGTGGAGTCCCTCTTTCTCGAAAATTGCTTGAAATTGGAGCACCATTCACTTTCTCGTATTGAGGAACATGCTTGTTTGTCATTGAAGCGAGGAGCTTATCTCAATCGAACTGGTGCTTTTTGTTTCCCAGGAAGCCAAATTCCAGAGTGGGTTCGATATAGCCAGACGATTAAGGCTTCGAGTTTCATAACTATTGAACTCTCTTCAGTTGCCAACAACTTGGTGGGCTTTGTTTTCTGCTCTGTTCTTCCTCAGTTCACGTCAAAGCCAAATTGTCAGAGTTACTTGAAATGCCAAATGCAGCTTGAAGATGGTGAACGAGTTGACAACATAAGTGACGATATGAGGATAACAAACCTAAATTCACATCATGTTTTTCTATGGTATGATCCGATCCACTCTGTATGCCTTTTAAGGGAACTTATACAAAGAGAGGAAGATCAAGGCATCAAAGGTAATTCTAAGCTTTCATTCGAATTTTCTGTCGTCTCTTATGATGAGAATTATGAGATAACCGAACATGATGGTTTGATAGAAGAATGTGGAGTATGTCCAATATATGCTTCTGAATATCACAATTTCCTTCAACAAATGGAATTTGGGTTGGAGTTGGGTGGCCAAGAGAGGAGTGGTCATGATAATGATCAGGATTCACAATCTGGAATTATGGAATATGCTAGTTCATGTTTGAAGCAAGCAATATATGATAATCTCGAAAGAAGCATGATTTCTTTCCCAAAAACGACAATTCCAAAGTGGTTTACATATCATAATTCAACAGAATATTCTTCCATATCTGTTTCTATCGCTCCAAATTTGGACGATTTATTGGGTTTCATTTTCTGCTTTGTTATTCCTCAATTCTGCTCAAAAGAAAAGGATCAGAGTCACTCAGGATGTCGATGCAGATGGCCTTCGCCAGATACTTTTCATACCGAAAGAGTCAGTACGGTGGATCGAGGTTTTGAAGGCCCAAGAGGATGGCATTATTCCATGACACGGTTGAATTCGGATAATTCTTTCCTGTGGTATGATCCCCTTTTTTGTGAATTGATCATAGAGGAAGTTAGAAGAAAAAGAGGCATTGATGAGAGAACAAGTAATTATAATCCAACGCTTTCATTTGAATTTGAGTTTGGTGATCGCTTGATCAAAGAATGTGGAGTACGCCCAATATACGCCTCGGAATATAACGATTTCCTTCAACTGAAGGAATTGAAGATGAAGCAGGGCATGAAGACAAAGAGGCCTCGGGATACTTGGGATGGGGATGAAGATGAACAACTCACTCCAGCAAAGAAATTGAAGGAATCTTGTGTTATTCAACCTGAGAAAATTGATCATTTGACATGGAACAAGTCTGCAGCAAGGGCAGCTATAATGATTGGTGGTACATATTCAAGTGTTATTTCCAAGATTTCTGTCATCTATCCAAGATGGACTAGTAACACACTGCTGAAAAATATGAGTTTGACAAAATGCAAGTATAATGAACCTCTCGTGCCAATACTTATTATCATCCTCTATCATCTTCGAGAAGTCAAATTTGGCCTCAAGCTTCCATGGAATAATCTGCCATCTTTTTGGATAAGCAAAGCCACCTCTATCATCTCCACCGAGGTCGGCAGAGCCACCATCTCCGATGCCAACGCGCACCACCTCCTCCACGATATTCTCCAGCGTCTCTCTTATGATTTCTCTCTATACTCTGAGTTCTATAATCGTTCATGGTATCAGAGTAGCGATCATCTGAAGCAATGGAGGAAATCTACTGGTTCATCTCAATCATCGCTGAGCAAGACTCCGAGCAAGGTCATGATATCGGCAAGTCAGGGTGATATCGTCACTTTCACTCACTTGATAACTGTGAGGCTTGAGGAACACAATAACCTCCTCTGA 5043 0.4017 MILRSELADHSIMAAASSSSSSSSSSSLPPKKHDVFLSFRGEDTRRSFTSHLHTALCQRGIRTYIDYELPKGDDISDALIGAIQDSSIAVVIFSQNYASSKWCLNELLQILWCREVQGQLVIPVFYQVDPSHVRHQRGTYREAFAKHERDFRLHQDQVNKWKQALFLTANLAGYDSRICRDESELTQNIVNNVLCNVNLTCPSSPLTDLVGIDENCAEIERLLEKAPIIGIWGMGGIGKTTMAKALFIKLSSKFEGRCFLENLREDVEKHGLTHVRDKLLFELLEEERSYHRPPNVAGSAFIKRRLSCKKVFIVLDDVSSWRQLEYLAPYCDHLGPGSKVIITTRDKQFLVIGKVNEIYEAQPLSGHKSAELLNLKAFDKYHPKIGYEFLSKRVVDYAKGIPLVLVVLGSFLRSKSPKEWDSALSKLKKSPNEDIFEVLKLSFNGLNHEEKEMFLDIAFFLKGETEDYVITILESYDFHARIGLKTLVDSTLISVEDGNVYMHNLIQEMAYEIVHQECIKEPGRRSRLHDPKEVYYVLKNNTGTDAIEGIVLDLSKLSHLTLSPDTFKKMPKLRFLKFYSPKDRRSCKVNLSSGLESLSEQLRYLQWDGYPLESLPSTFCPEKLVELCMQNSHIKKLWDGVQDFVNLRRINLARCKQLIELPDFSKAHNLESVNLSSCESLCYVHPSILALQRLVTLDLNRCIKLKNLHSEIHLQSLRRLYVSWCFSLTEFSLSSHEIASLELETTRIEILDSSIGHLSNLKQFRLNCSRLKNLPINELCCLRSLEELGLFNCEQAIDKVKLHILFDALRLLEILCLDGCQKLTELPDNIKHLSGLKALSLKNCERLQSLPELPPSIEELDATNCPSLEALVLISEMESSTSPEEGMMALTPYSSTGYLSKLRKLRLNVSSLKNFSIEQLCCLRSLKELSLFDCGEVIDKSKLRMLFDALSSLVDLYLEGCSDLDELPDNLSSLSLLYLLGLEGSNVKYLASSIKHLPRLDYIYLTNCRTLRSLPELPPFTRYVKATNCSSLQAVSLLKNPRQRQKYLVESLFLENCLKLEHHSLSRIEEHACLSLKRGAYLNRTGAFCFPGSQIPEWVRYSQTIKASSFITIELSSVANNLVGFVFCSVLPQFTSKPNCQSYLKCQMQLEDGERVDNISDDMRITNLNSHHVFLWYDPIHSVCLLRELIQREEDQGIKGNSKLSFEFSVVSYDENYEITEHDGLIEECGVCPIYASEYHNFLQQMEFGLELGGQERSGHDNDQDSQSGIMEYASSCLKQAIYDNLERSMISFPKTTIPKWFTYHNSTEYSSISVSIAPNLDDLLGFIFCFVIPQFCSKEKDQSHSGCRCRWPSPDTFHTERVSTVDRGFEGPRGWHYSMTRLNSDNSFLWYDPLFCELIIEEVRRKRGIDERTSNYNPTLSFEFEFGDRLIKECGVRPIYASEYNDFLQLKELKMKQGMKTKRPRDTWDGDEDEQLTPAKKLKESCVIQPEKIDHLTWNKSAARAAIMIGGTYSSVISKISVIYPRWTSNTLLKNMSLTKCKYNEPLVPILIIILYHLREVKFGLKLPWNNLPSFWISKATSIISTEVGRATISDANAHHLLHDILQRLSYDFSLYSEFYNRSWYQSSDHLKQWRKSTGSSQSSLSKTPSKVMISASQGDIVTFTHLITVRLEEHNNLL 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2167 1680 SUPERFAMILY "Winged helix" DNA-binding domain 434 538 IPR036390 -
Prci12g2167 1680 Gene3D - 198 356 IPR027417 -
Prci12g2167 1680 PRINTS Disease resistance protein signature 305 319 - -
Prci12g2167 1680 PRINTS Disease resistance protein signature 831 847 - -
Prci12g2167 1680 PRINTS Disease resistance protein signature 398 412 - -
Prci12g2167 1680 PRINTS Disease resistance protein signature 228 243 - -
Prci12g2167 1680 Gene3D - 29 197 IPR035897 -
Prci12g2167 1680 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 734 IPR044974 GO:0006952
Prci12g2167 1680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 457 IPR027417 -
Prci12g2167 1680 Pfam Leucine Rich Repeat 623 642 IPR011713 -
Prci12g2167 1680 Pfam TIR domain 32 209 IPR000157 GO:0007165
Prci12g2167 1680 Gene3D - 364 447 IPR042197 -
Prci12g2167 1680 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 174 IPR035897 -
Prci12g2167 1680 FunFam Disease resistance protein (TIR-NBS-LRR class) 29 199 - -
Prci12g2167 1680 Pfam C-JID domain 1293 1444 IPR045344 -
Prci12g2167 1680 Pfam C-JID domain 1090 1238 IPR045344 -
Prci12g2167 1680 SUPERFAMILY L domain-like 806 1069 - -
Prci12g2167 1680 FunFam Disease resistance protein RPS4 544 736 - -
Prci12g2167 1680 SUPERFAMILY L domain-like 550 871 - -
Prci12g2167 1680 Gene3D Ribonuclease Inhibitor 713 880 IPR032675 -
Prci12g2167 1680 Gene3D Ribonuclease Inhibitor 535 712 IPR032675 -
Prci12g2167 1680 Gene3D Ribonuclease Inhibitor 888 1078 IPR032675 -
Prci12g2167 1680 ProSiteProfiles TIR domain profile. 31 197 IPR000157 GO:0007165
Prci12g2167 1680 Pfam NB-ARC domain 227 433 IPR002182 GO:0043531
Prci12g2167 1680 SMART till_3 32 171 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2167 Prci-Chr12 39092911 39105552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2167 31 896 WRKY Transcription Factor Family AT4G12020 32.466 9.79e-107 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2167 - - pcin:129289344 3297.29