Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2159 ATGGGTACTGCTGCTTCAACTCCAAGCTTTTCCTCTCAACCGATTTCTTCAAAAAACTATGATGTGTTCATTAGTTTCAGAGGAGAAGACACGCGCAGAAATTTCACTAGCCATCTTTATACTGCTCTCACCCAAAAGTCCATAAGAACCTATATTGATTATCAGCTTCCCAAAGGTGATGACATCTCAGAATCGCTCATCCAAGCAATCAAGGATTCTCTTGTATCTGTCGTGGTCTTCTCTGAGAACTACGCTTCCTCAAAGTGGTGCTTAGATGAACTCTCCCAAATTCTCCGATGCAGGAAAGATCAGGGCCAGTTTGTTATACCTGTCTTCTACGAAGTTGACCCATCAGATGTTCGCAAGCAGAAAGGGACTTACCAGGAGGCATTTGCAAAACATGAGAGAGATTTCAGGCACAATCAGGACAAGGTGAAGAAATGGAAAGATGCTCTTTTCGAAACTGCCAATTTAGCTGGCTGGCACTCTCAATCCTTCAGGGATGAATCTGAACTAATTCAGAACATTATCAACGATGTTTTGCGAAAATTGGATCACAGGCATCCAAGTATATTAGAAGGACTTGTTGGAATTGATGAAAACTGTGAATCTATTGAATTGTTACTGGAAAAAGTTCCAATAATTGGAATTTGGGGAATGGGCGGGATAGGCAAGACAACCATGGCTAAGGTTGTATTTGACAAACTATCTCCTCATTATCAAAGTTGTTGTTTCATTGAAAATATAAGGGAAGAGTCAAAAAATCATGGATTAAAATATATACGTGATAAGCTCGTTTCGGATCTTCTCATGGATGAAAACATACATTGGAGTCCACCAAAAGTCTTAGGATCTGATTTTGTTAGGAGAAGGCTAAGTTGGAGAAAAGTTTTCATTGTGCTTGATGATGTTGATAATCCAAAGCAATTAGAATATCTAGCAAAAGAATGTGATTGCTTGGGACAAGGCAGTAGAGTTATCATAACAACAAGAGATAAGCACTTGCTTATTGGAAGAGTAAATGAAATATATATGGCCAAGCCATTGAACTTTCAAGAGTCCTTCAAGCTTTTCAACTTGAAAGCTTTTCACAGAGATCATCCTGAAATTGGATATGAATGGCTATCAAAAAGGGTTGTTTTTTATACCAAAGGAAATCCTTTAGCTTTAATAGTTTTGGGTTCTTTTCTTCATTCCAAAACTAAAAAAGAATGGGATAGTGCATTGAGAAGATTGAAAAAGATTCCAAACCAAGATATTCAGGAAGCATTAAAATTGAGCTTTGATGGATTAAACGATGAAGAGAAGGAAATATTTCTAGACATTGCATTCTTTTTGAAAGGTGAAGTCAAAGAACATATAATACAGTTATTAGACAGCTGTGGATTCCATGCAAGCATTGGCATCAGAACCCTCCAAGATAAGGCTCTTATTACCATGGGAGAAAAAGTGTGGATGCATGACTTAATACAAGAAATGGGTTGGGAAATTGTTCGTCAGGAGTGCATCAAAGAACCAGGAAGACGCACCAGATTACGGGACCCTAAAGATGTCTATGATGTTTTGAGAAACAATCGGGGAACTGAAGCTGTTGAAGGCATAATATTAAACGTGTCTCGAATTAGAGATATATACTTGGCTGCCGACACCTTCAAAGAGATGACCAATTTAAGATTCCTTAAATTTTATTCCTCAAGCAATACTGGATCATGCAATGTGCACCTTCAAATGGGTCTTGAGTCTATTTCTAATAAAATGAGGTACTTTGAGTGGAATGGGTATCCTTCGAGCTCTTTGCCATCAACTTTTTGTGCTGAGAGCCTTGTTGAACTGAAAATGCAATTCAGCCAAGTCTATACACTTTGGGAGGGTGTGCAGGATTTTGTGAATTTAAAGAGAGTAGATCTTCGTTTTTCCAGAAAATTGATTGGGTTGCCAGATTTCTCTAAGGCCCAGAATCTTGAATCGGTGAATCTATATTACTGTGAAAGTTTGTGTTATGTTCATCCATCTCTCTTATCTCTCAATAGCCTTGTTTCGTTGGATTTAGGCAGATGCAAAAACCTTAAGAGTCTCCAAAGTAAGACTCATTTAAGATCTCTTAGAAAAGTCCTGGTTCATGACTGTCCTAATCTGACGGAATTCTCATTATCATCAGAAGAACTAAGATGTTTGTTTTTAGGATCGACTGGAATAGAAATTCTGCACCCATCAATTGGGAGTCTTACTAAGCTCAGAAGTCTTCATCTCAATGGTTCAAAATTGAAGAACTTTCCACTAAAGGAGTTGTGTTGCTTGAGATCTCTTGAGGATCTTGGCATCTACAAGCATGCATTCGACAAACCTGCGCTACATGTGCTATTTGAGAACTTGCGTGCTATACGGAAACTCTCTTTCCTGAATTGCTCTAACTTAACTGAGTTACCAAACAACATCAAGCAACTCTCAAGACTACAAAAGCTTTATTTAAGAAGTTGCAGAAATCTTCAATATTTACCAAAGCTTCCTCTATCCGTTAAAGAATTAGATGTCACCGATTGCACATCAATTTCAATCAACCGTAAGTTGTCAAAGGAAGTAGGAAAGCTGGTTCCAGCACTGCACGCTTCCTCAATTGGGCATCTTGCCAATCTCAAAACTCTACTTCTCAATGCTTCAAGTCTTGGCGATCTTCCACTAACTGAGTTATGTTGTTTTAGATATCTCATGGAGCTTCGCCTTCGTAAATGCAGACACCTAGTGGATGAACCAAAGCTACATATACTATTTGAATCCCTGCGATGTCTACAAATACTGGATTTGGAGGACTGTTTTAACTTAACTAAACTCCCCTACAATATCAGACATCTCTCACGGCTACAAAAACTTACTTTGAATGGTTGCACTAGCCTTCAGTTTCTACCACAGCTTCCACAGTCCCTTAGAAATTTTATTGTCAGTAATTGTACATCATTAGAGAAAGTGTTTGCTTCAACAATTTCAAGACTATTACGGGTAAATGGTCATAATTTCATTTCATTTCACAACTGTGAGAAATTGGATGTGCGTTCACGTTGTGCTATTGGGAAACATGTAGAGTTCTCATTGAAGCGAGCAGTACGTAACAAGCAAAGATTTACAGTTTTTTATCCAGGAAACAGCGTTCCGTTGTGGTTCGGGCATAATTGGTCAATGAAGGGTTTGGGAAAAAATTCAAGTGGCTGTGACTTGCAAGTGCTACTTTGA 3225 0.3842 MGTAASTPSFSSQPISSKNYDVFISFRGEDTRRNFTSHLYTALTQKSIRTYIDYQLPKGDDISESLIQAIKDSLVSVVVFSENYASSKWCLDELSQILRCRKDQGQFVIPVFYEVDPSDVRKQKGTYQEAFAKHERDFRHNQDKVKKWKDALFETANLAGWHSQSFRDESELIQNIINDVLRKLDHRHPSILEGLVGIDENCESIELLLEKVPIIGIWGMGGIGKTTMAKVVFDKLSPHYQSCCFIENIREESKNHGLKYIRDKLVSDLLMDENIHWSPPKVLGSDFVRRRLSWRKVFIVLDDVDNPKQLEYLAKECDCLGQGSRVIITTRDKHLLIGRVNEIYMAKPLNFQESFKLFNLKAFHRDHPEIGYEWLSKRVVFYTKGNPLALIVLGSFLHSKTKKEWDSALRRLKKIPNQDIQEALKLSFDGLNDEEKEIFLDIAFFLKGEVKEHIIQLLDSCGFHASIGIRTLQDKALITMGEKVWMHDLIQEMGWEIVRQECIKEPGRRTRLRDPKDVYDVLRNNRGTEAVEGIILNVSRIRDIYLAADTFKEMTNLRFLKFYSSSNTGSCNVHLQMGLESISNKMRYFEWNGYPSSSLPSTFCAESLVELKMQFSQVYTLWEGVQDFVNLKRVDLRFSRKLIGLPDFSKAQNLESVNLYYCESLCYVHPSLLSLNSLVSLDLGRCKNLKSLQSKTHLRSLRKVLVHDCPNLTEFSLSSEELRCLFLGSTGIEILHPSIGSLTKLRSLHLNGSKLKNFPLKELCCLRSLEDLGIYKHAFDKPALHVLFENLRAIRKLSFLNCSNLTELPNNIKQLSRLQKLYLRSCRNLQYLPKLPLSVKELDVTDCTSISINRKLSKEVGKLVPALHASSIGHLANLKTLLLNASSLGDLPLTELCCFRYLMELRLRKCRHLVDEPKLHILFESLRCLQILDLEDCFNLTKLPYNIRHLSRLQKLTLNGCTSLQFLPQLPQSLRNFIVSNCTSLEKVFASTISRLLRVNGHNFISFHNCEKLDVRSRCAIGKHVEFSLKRAVRNKQRFTVFYPGNSVPLWFGHNWSMKGLGKNSSGCDLQVLL 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2159 1074 SUPERFAMILY L domain-like 485 844 - -
Prci12g2159 1074 SUPERFAMILY L domain-like 791 992 - -
Prci12g2159 1074 Gene3D Ribonuclease Inhibitor 521 696 IPR032675 -
Prci12g2159 1074 Gene3D Ribonuclease Inhibitor 858 1019 IPR032675 -
Prci12g2159 1074 Gene3D Ribonuclease Inhibitor 697 857 IPR032675 -
Prci12g2159 1074 PRINTS Disease resistance protein signature 291 305 - -
Prci12g2159 1074 PRINTS Disease resistance protein signature 214 229 - -
Prci12g2159 1074 PRINTS Disease resistance protein signature 383 397 - -
Prci12g2159 1074 PRINTS Disease resistance protein signature 673 689 - -
Prci12g2159 1074 Pfam Leucine Rich Repeat 608 626 IPR011713 -
Prci12g2159 1074 Gene3D - 16 182 IPR035897 -
Prci12g2159 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 851 IPR044974 GO:0006952
Prci12g2159 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Prci12g2159 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Prci12g2159 1074 Gene3D - 183 341 IPR027417 -
Prci12g2159 1074 Pfam TIR domain 19 190 IPR000157 GO:0007165
Prci12g2159 1074 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Prci12g2159 1074 Pfam NB-ARC domain 214 416 IPR002182 GO:0043531
Prci12g2159 1074 Gene3D - 349 432 IPR042197 -
Prci12g2159 1074 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Prci12g2159 1074 FunFam Disease resistance protein RPS4 528 720 - -
Prci12g2159 1074 SMART till_3 19 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2159 Prci-Chr12 39042550 39046854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2159 8 828 WRKY Transcription Factor Family AT4G12020 31.948 3.66e-99 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2159 - - pcin:129288608 2113.19