Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2153 ATGCAAAAATTGAACCGTCCATCTTCAACCGCACTAGCAAACATTGTTGGAATTAACAAAAATTGCGATCGTATTGAATTGTTCTTGGAAAGATTCTCTACAATTGGAATTTGGGGTATGGGCGGAATAGGTAAAACAACCATGGCCAAAGTTGTGTTTGCAAAATTCCGCTCTCAGTTTGACAGTTGTTGCTTTTTGGAAAATTTAAGAGAAGAGTCAGAAAAACATGGGTTAAAATATATACATGATAAACTTCTCTTTGAACTATCAAATGATACATTTCTTGAAAGGCTTAGTCGTAAAAAAGTTTTGATTGTACTTGATGATGTTAGCAACACAAGTCAGTTAGAATATTTAGAAAATGAAGCTCCTCGTTTGGGACTGGGTAGTAAAGTCATCATAACAAGTAGAGATCAGCATGTACTTGATGAAAGAGTTGACAAAATACACAAGGCCATAGCATTGAACTATGATAGCTCACTTCAGCTTTTCAACCTCAAAGCCTTTCGAAAGAATGGTTATAAAAGTGAGTATAAAAAATTAGTTGAAAAAGTGGTGGCCTATGCCAAGGGCAACCCATTAGCCTTAACTATTTTGGGTTCATTTTTGCATTCCAAAACTATAAAGGAATGGGAAAGTGCATTGGTTAAATTGGAGAAGAGGACCTATCAAGATATTCAAGCTGTGCTAAAATTGAGCTATGATGGACTAGATGACGAAGAGAAAGAAATGTTTTTAGATATTGCTTGCTTTTTGAAAGGTGAATCTAAGGGAGATGCAATAACAACATTAGAGGGTTGCGGCTTTCATGCAAGCATTGGTTTGAGAACCCTTATGGATAAAGCACTGATAAGTATTGACTATGACACTGTGCAGATGCATGATTTAATCCAATCAATGGCTTTAGAAATTGTTCGTCAAGAGAACATAAAAGATCCTGGAAGACGAAGTCGACTATGGAATCCTGATGAGATCTATGATGTACTAAAAAATAATCAGGGATCTGATGCAATTCATGGCATAATCTTAAATTTGTCTGAAGTTAGAGATATACAATTGAGTATTGATACCTTTAAAAAGATGACTAATTTAAGATTTCTGAAATTCTATTCCCCCCGGGATGAAAGATCATGTATAGTGAATCTTCCTTCAGGGCTGGATTCATTTTCCAATTCATTAAGGTATCTCCAGTGGGACAAATTTCCTTTAGAGTCTCTGCCATCATTATTTTGTGCTGAGAAACTAGTTGAACTTCGCATGCCTAACAGCAACCTAGAAAAACTATGGGATGGAGTGCAGAACTTGGTGAATTTAAGGAACATAGACCTTACTGGATCTAAACAATTAATAGAGTTGCCAGATTTCTCAGCTGCTCAAAATCTTGAAGTGGTTTATCTTTCAAGTTGTGAAAGATTATGCCATCTTCATCCATCTATTTTATCTCTCCCAAGATTGCATGATTTGAAACTTTCCTATTGCAAAAACCTAAAGAGTTTGAAGATGGAGAGTCATTCAAATTCTCTCTCAAGCCTACTTGTTAATGGTTGCTACAGTCTTAAGGAATTTTCATTCTCTTCAAACAAATTACTTAATTTAGACTTACTTCTAACAGGCATTGAGATATTGGACTTATCAATGGGCCATATGGAGCAACTCCAACAACTCTCTCTTAATGGCTTGACATTAAAGAATCTTCCAGTTAATGAGATTTGTTGCTTGAGATCTCTTCGGGAGCTTTATCTTTATGGTTGCATAGAAATAATTGACAAATCAAAGCTACATATCTTATTTGATGCTTTGCTATATCTAGAATCAATTGATTTGGATGGGGCATGCAGATTAACTGAACTTCCAAACAATATCAAGCATCTCTCAAGGCTAAAATCTCTTTACATAAACAATTGCAAGAGCCTTCAATCTTTACCAGAGTTTCCACCATCTATTGAAAGATTAAATGCTTGCAACTGCATCTCATTGAAGACACTACAACTCACTTCTCATTTTGAATCTTCATTATTGGCAAATGAAATAATCTCGGGTTCAACACTCTGTTCCTCAATTAGTTATCTTAGAAATCTTTGGGACCTTGATCTTAGTGGTTGTGAACAATTGCATGAATTGCCTGAAATCATCAATTCCTTATCTTCATTATCTTCATTGGATTTGGAAGGAAGCAATGTAGAGAGCTTGCCTGCCAACATCAAGCATCTTTCAAATCTAACAGGTATTTGGTTGAGAAATTGTAAAAGACTTCGTACTCTACCAAGATTGCCACCATCCATTGAAACAATTAACACTGATGATTGCATATCATTAGAAATTGTACCTCCCTCAATAACTTGTATGCCACAACTGACGTTCCTAAGTTTGAAACATTGCTTGAAATTGGAGAATCGTTTTTATCCCATGTTATAA 2415 0.3545 MQKLNRPSSTALANIVGINKNCDRIELFLERFSTIGIWGMGGIGKTTMAKVVFAKFRSQFDSCCFLENLREESEKHGLKYIHDKLLFELSNDTFLERLSRKKVLIVLDDVSNTSQLEYLENEAPRLGLGSKVIITSRDQHVLDERVDKIHKAIALNYDSSLQLFNLKAFRKNGYKSEYKKLVEKVVAYAKGNPLALTILGSFLHSKTIKEWESALVKLEKRTYQDIQAVLKLSYDGLDDEEKEMFLDIACFLKGESKGDAITTLEGCGFHASIGLRTLMDKALISIDYDTVQMHDLIQSMALEIVRQENIKDPGRRSRLWNPDEIYDVLKNNQGSDAIHGIILNLSEVRDIQLSIDTFKKMTNLRFLKFYSPRDERSCIVNLPSGLDSFSNSLRYLQWDKFPLESLPSLFCAEKLVELRMPNSNLEKLWDGVQNLVNLRNIDLTGSKQLIELPDFSAAQNLEVVYLSSCERLCHLHPSILSLPRLHDLKLSYCKNLKSLKMESHSNSLSSLLVNGCYSLKEFSFSSNKLLNLDLLLTGIEILDLSMGHMEQLQQLSLNGLTLKNLPVNEICCLRSLRELYLYGCIEIIDKSKLHILFDALLYLESIDLDGACRLTELPNNIKHLSRLKSLYINNCKSLQSLPEFPPSIERLNACNCISLKTLQLTSHFESSLLANEIISGSTLCSSISYLRNLWDLDLSGCEQLHELPEIINSLSSLSSLDLEGSNVESLPANIKHLSNLTGIWLRNCKRLRTLPRLPPSIETINTDDCISLEIVPPSITCMPQLTFLSLKHCLKLENRFYPML 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2153 804 SUPERFAMILY L domain-like 292 664 - -
Prci12g2153 804 Gene3D - 154 238 IPR042197 -
Prci12g2153 804 Pfam NB-ARC domain 34 235 IPR002182 GO:0043531
Prci12g2153 804 Pfam Leucine Rich Repeat 414 433 IPR011713 -
Prci12g2153 804 PRINTS Disease resistance protein signature 97 111 - -
Prci12g2153 804 PRINTS Disease resistance protein signature 34 49 - -
Prci12g2153 804 PRINTS Disease resistance protein signature 189 203 - -
Prci12g2153 804 PRINTS Disease resistance protein signature 688 704 - -
Prci12g2153 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 523 IPR044974 GO:0006952
Prci12g2153 804 SUPERFAMILY L domain-like 595 796 - -
Prci12g2153 804 Gene3D Ribonuclease Inhibitor 653 801 IPR032675 -
Prci12g2153 804 Gene3D Ribonuclease Inhibitor 328 504 IPR032675 -
Prci12g2153 804 Gene3D Ribonuclease Inhibitor 505 652 IPR032675 -
Prci12g2153 804 Gene3D - 10 150 IPR027417 -
Prci12g2153 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 248 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2153 Prci-Chr12 38955760 38960498 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2153 603 775 WRKY Transcription Factor Family AT5G45050 31.472 3.16e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2153 - - pcin:129289671 794.653