Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2149 ATGGGTCATCACTCTTGCTGTAACAAGCAGAAGGTGAAAAGAGGGTTATGGTCACCTGAAGAAGACGAGAAACTCATCAACTACATCACCACTTATGGCCATGGTTGCTGGAGCTCTGTCCCTAAACTTGCAGGACTTCAGAGATGTGGCAAAAGTTGCAGATTAAGATGGATAAATTATCTGAGACCTGATTTGAAACGAGGAAGCTTCTCTCCACAAGAAGCAGCTCTCATTATTGAACTCCATAGCATTCTGGGCAACAGGTGGGCTCAGATAGCAAAGCACCTACCTGGAAGAACAGACAATGAGGTGAAGAACTTTTGGAATTCAAGCGTCAAGAAGAAGCTTCTTTCTCATGATCATCATCTTCTTCTTCTTCCTCCTTTGGCCACTTGTAATGGTGCTTCTGTGGAAAGCTTCTTCCCTTTCACTCCAAACCCTAATAATAACAACATGATCTTAATCTCTCACCATAATCATCATCCCCAAGACCAGATGTACCTTCCCACTTCATCATCACCACTGATTCAAGGTTTTCAATTTGATCATGAAGCTTCTGAAGATCTTAAGATAGGCAATCTCCTTCATCTCCAGAATCCTAATTTGCAGGAAATTACACCATCCAATGGTACTATTCCATCTTCTTATAATGAAGATAGTACTTGGTCACTGGTAAATCATGAAAATAATCAGATTCCCAGAAGTGATCATACCAATGACCTGTTATCCCCACATTACATTATTGATGAGAAATTCATGAACCCAAGTCAACCTGTTGATCCTAGTACTGGACAGAAATTAATGTTTCAGAGTTCTGTCGAGGATTATAATATTGTTTGTGGCGTCCCGTATTCATCTTCATCTGGTTCCCAAGAACAAGACCCTCTTGTTGCAAGAATCATGCAGAGCTATCCATCTTCTGGTTTTGGCTATCCACAAGATCAAAGTCAAATGGCTGACATGGCAGCCAATCACATGGAGTTCATAGAAGCCATCATGTCGTCGTTGCCATTATTATCATCATCATCCTCCTCGTCCCCGTCCCCACTGTCATCGAACAATCAAATTTTCGCAAATACCCCTAATCTTCCTTCATGTTGGGAGCCATGA 1110 0.4162 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSVKKKLLSHDHHLLLLPPLATCNGASVESFFPFTPNPNNNNMILISHHNHHPQDQMYLPTSSSPLIQGFQFDHEASEDLKIGNLLHLQNPNLQEITPSNGTIPSSYNEDSTWSLVNHENNQIPRSDHTNDLLSPHYIIDEKFMNPSQPVDPSTGQKLMFQSSVEDYNIVCGVPYSSSSGSQEQDPLVARIMQSYPSSGFGYPQDQSQMADMAANHMEFIEAIMSSLPLLSSSSSSSPSPLSSNNQIFANTPNLPSCWEP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2149 369 MobiDBLite consensus disorder prediction 343 362 - -
Prci12g2149 369 FunFam MYB transcription factor 6 66 - -
Prci12g2149 369 SMART sant 66 114 IPR001005 -
Prci12g2149 369 SMART sant 13 63 IPR001005 -
Prci12g2149 369 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci12g2149 369 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci12g2149 369 MobiDBLite consensus disorder prediction 343 369 - -
Prci12g2149 369 Gene3D - 11 67 - -
Prci12g2149 369 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Prci12g2149 369 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci12g2149 369 CDD SANT 17 61 IPR001005 -
Prci12g2149 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci12g2149 369 PANTHER MYB DOMAIN PROTEIN 55 1 282 - -
Prci12g2149 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci12g2149 369 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci12g2149 369 CDD SANT 69 109 IPR001005 -
Prci12g2149 369 FunFam Myb transcription factor 69 116 - -
Prci12g2149 369 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2149 Prci-Chr12 38905124 38907113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2149 1 118 MYB Transcription Factor Family AT3G13890 95.763 5.93e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci12g2149 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2149 K09422 - gmx:100785147 330.102