Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2130 ATGAACATCGTCTCTCGTACCACCACCACCAGCAATAACCACAACAACAACAACCAGGCTTGTGCTGCTTGTAAGTACCAACGTAAGAAATGCGCTTCTGACTGTATTCTCGCACCTTATTTCCCTCACGATCGCCAACGTCAATTCCAAAACGCCCATAAATTGTTTGGTGTCAAGAAGATCACCAAGATCATCAAACACCTCGACCCCCTCGATAAGGACCAAGCCATGCGAACCATCATTTATCAATCCGACATGCGAGCCAACGACCCCGTCGGAGGTTGTTACAGATACATTCTAGAACTTCAAGCTCAGATCAAATACCACCAGGCTGAGCTCGAGCTCGTTCTTCAACAGCTCGCTGTTTTTCGATCTCAAGCTCACCTTCATCATCATCATCATCATCATCATCATTTGAATCCGTATAATAATAACCCTATTGCACCATTACTACCTCCGACTCATCATTATCAATATCTTCAACAGTTGCCACGGCAAGATCAGACGTACATGATAGTCGAGCAGGAACATGAGAATAATAATGATGTTACTTTGCAGGACGAAGTTAGTGGTTGGCCTGTGCAGGATTCGGTGTCGTTGTCGTCTTTATCGATACAGAACAAGAATAATGGAGACGACGTAAGTGGTGGTTATGTGGGTGATGAATTATATAATGATCATAAGTCTTCGTCTTCGTCTTTGCTTGACATTCATTGTGATGATGAAAGGAATGAAATCGGTTTTGATGAACCTCAAGAATTTGTGGATCGCAGTGATGAAGGGGTTTTGTTTAAGATAGAGAATGCAGTATTAAAAGCAGAGGCGGATTGCATTCAACAAAATCAAGATCATGATCTCAAAGAAAAATTGGATATGGTTCTGGACCGGGAAATAATCGGCCAACAGGAAACAAATACTTTTATCGAATCAGAATAG 936 0.4209 MNIVSRTTTTSNNHNNNNQACAACKYQRKKCASDCILAPYFPHDRQRQFQNAHKLFGVKKITKIIKHLDPLDKDQAMRTIIYQSDMRANDPVGGCYRYILELQAQIKYHQAELELVLQQLAVFRSQAHLHHHHHHHHHLNPYNNNPIAPLLPPTHHYQYLQQLPRQDQTYMIVEQEHENNNDVTLQDEVSGWPVQDSVSLSSLSIQNKNNGDDVSGGYVGDELYNDHKSSSSSLLDIHCDDERNEIGFDEPQEFVDRSDEGVLFKIENAVLKAEADCIQQNQDHDLKEKLDMVLDREIIGQQETNTFIESE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2130 311 Pfam Lateral organ boundaries (LOB) domain 20 116 IPR004883 -
Prci12g2130 311 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Prci12g2130 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2130 Prci-Chr12 38691660 38697105 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2130 19 136 AS2 family AT3G13850 71.186 1.13e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci12g2130 LOB 9.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2130 - - gmx:100786728 269.626