Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2128 ATGGCTTCGAGTCAGGTAGAAGGATTATCGCTTCCTATGGACGATTATGAGACCTTGCTTTCCACCACTGACGTTGAGCTGCTCAAGAGAGTATGGCGTAACGAGAAGGCGGCTCCCGAAATTCTTCGTTTCGAGACCGGTCTGATTGACCGCATTAAAGAGCAGATCCAACTAATGGAAGAAACAGTGGAGGAGAAATCAGCCGCTGGCGTTGATCCCCTTTCAATATCTCTCTATCAGATGGACTTGGATAGAGCCCAGTTTTTACTTAGATCGTACCTCCGGATTCGCATTCAGAAGATTGAAAAATTCGTCTTCCACATTGCGAAAACTGATGAACTTTGGAATAAGCTGTCTAAAGAAGAGAAAATTTTCGCTAGAAGGTGTACTGAAGATCTAAAACAACACTTGGAGGATAGTGTTCTATCAAAGCTGCCCGAAAATTATCAATCTTTCCAGAAGCAATCTGTAATAAGTGAAGAGGACGACATGATTCCAGAACCAACACTAGACACATTTGTAGTGTGCAGAAGCAAAGAGTATCTCACAGGCATCCAGCTTGAGGATGGGCCAGTTGATGACAGGTCGATGCTGTTTGAGATGGAGCCCGGTGTCCTGCACTTCATATGTTATAAGTCTATAAAGGCACTTGTGGAGAGCGGGAAAATTGAACTTCTCTGA 681 0.4405 MASSQVEGLSLPMDDYETLLSTTDVELLKRVWRNEKAAPEILRFETGLIDRIKEQIQLMEETVEEKSAAGVDPLSISLYQMDLDRAQFLLRSYLRIRIQKIEKFVFHIAKTDELWNKLSKEEKIFARRCTEDLKQHLEDSVLSKLPENYQSFQKQSVISEEDDMIPEPTLDTFVVCRSKEYLTGIQLEDGPVDDRSMLFEMEPGVLHFICYKSIKALVESGKIELL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2128 226 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 226 IPR031633 -
Prci12g2128 226 Pfam GINS complex protein 71 123 IPR021151 -
Prci12g2128 226 Gene3D - 12 216 - -
Prci12g2128 226 Coils Coil 49 69 - -
Prci12g2128 226 CDD GINS_B_Sld5 168 226 IPR031633 -
Prci12g2128 226 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Prci12g2128 226 SUPERFAMILY PriA/YqbF domain 170 226 - -
Prci12g2128 226 FunFam DNA replication complex GINS protein SLD5 11 216 - -
Prci12g2128 226 PANTHER SLD5 PROTEIN 13 226 IPR008591 GO:0006261
Prci12g2128 226 SUPERFAMILY GINS helical bundle-like 21 156 IPR036224 -
Prci12g2128 226 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2128 1 164 Core DNA Replication Machinery Family AT5G49010 64.634 1.07e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2128 K10735 - qsa:O6P43_008399 372.859