Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2125 ATGAACGTTCGCAACACCAACAATAACACCATCATCACCAATAATCAGGCCTGTGCTGCTTGTAAGTACCAACGTAAGAAGTGTGCTCCTGACTGTATTCTCGCACCTTATTTCCCTCACGATCGACAACGTCAATTCCTCAACGCTCATAAATTGTTTGGTGTCCGTAACATCACCAGAATCATCGAAAACCTTGACCCTCCCCGCCGCAACGAAGCCATGAGAACCATCATTTATCAGTCTGACATGCGTGCCACCGACCCTGTTGGAGGATGTTTAAGGCACATTCAAGACCTAGTAGCCCAAATTCAGTACCATGAGGCCGAACTTGAACTTGTTCTTCAGCAGCTCGCTGTGTTTCGTGCTCAAACTCATCGTCATTCTCATTATCACGAGGTTGTCGATTCTTCTCCCGATCCTTCCAGATTGTGTAGCCCTAATATTAATATTATTGCGCCAGTACCATCACCGGTTTCTCATTATCAATACATTCAACAACAAGGGCCGATGAATATGATGGTAGTGAATAAGGAACATCATGGTAATAACAATAATAATGTTCCTAGTGATTTGCGAGACGATGTTAATTATTGTATTGCCCAGGATTCAATGTCTTTGTCGTCCTTGTCGTTGCAGAACAGCACTAAGAATGGGGATGAACATAGTGGTTATGTGGGTGATGAATTGTATAGTGATCATAAGTCTTCGTCGTCATCTATGCTTGACATTCATCGTGATGACAGGTTTTGA 750 0.4307 MNVRNTNNNTIITNNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITRIIENLDPPRRNEAMRTIIYQSDMRATDPVGGCLRHIQDLVAQIQYHEAELELVLQQLAVFRAQTHRHSHYHEVVDSSPDPSRLCSPNINIIAPVPSPVSHYQYIQQQGPMNMMVVNKEHHGNNNNNVPSDLRDDVNYCIAQDSMSLSSLSLQNSTKNGDEHSGYVGDELYSDHKSSSSSMLDIHRDDRF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2125 249 MobiDBLite consensus disorder prediction 210 249 - -
Prci12g2125 249 Pfam Lateral organ boundaries (LOB) domain 17 112 IPR004883 -
Prci12g2125 249 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Prci12g2125 249 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2125 Prci-Chr12 38668981 38669730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2125 16 227 AS2 family AT3G13850 46.083 7.94e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci12g2125 LOB 7.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2125 - - pcin:129289336 458.759